Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_22921 |
Symbol | |
ID | 7195270 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011688 |
Strand | - |
Start bp | 286716 |
End bp | 287771 |
Gene Length | 1056 bp |
Protein Length | 337 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002183716 |
Protein GI | 219126965 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.858448 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCGTCGT TTAAGCTGAT GTTATTGGTC ATGATGGTGT TACAGAACTC ATCGACCGTC TTGGTTGGTC GTTACACACG ATCTGCCGTC GCAAAAGAGG ATCTCTACAG TGTTAGTCAC CTAATCATCT TGACGGAATG CAGCAAATTT CTCCTTTCGT GCGGGCTGGA ATTCTACACC ACTGGCGGGC AGCTCTATGA GTCGCTCCAG CAGCACGTAT TTAAGCGACC TACGGATGCA CTGAAGATCC TTGTGCCGGC CTTATTGTAT CTGGTGCAGA ACACCCTTTT GTATGTCGCC CTATCTAATC TGACGGCACC CATTTTTCAG GTCACCTACC AAGCGAAACT AGTCACAACG GCTCTCGTCA GTGTTCTTTT GTTACAGAGG TCTTACAGCC TTCAACAGTG GGTCTGTCTT TGTCTTCTTA GTTTTGGCGT TGCAACCGTT GTCTTGGGAG AAAAGTCCGG AGCACAGGAT GCTAAGGCCG ACCTGCAGCA AAATCTGTTC GTCGGACTTA TAGCTGTAAC GGTTGCCTGT ATGTCAAGTG CGCTTGCTGG GGTCTATTTC GAAATGGTTC TAAAAAAACC CAGTACAGGC GAGGATGCTC AACAGCCCGC TTCATTGTGG ATGCGCAACA TGCAGCTCGC CTTTTTCTCT ATTGTTATTG CCGTCCTCCA GTCTTCGACT GAGACCCCCA AGGAAGAGTT CATCGGAAAG CCTTATCTAC ACGGCTTTAC TCCATGGGTG TGGACATTGG TGGTCTTGCA GGCCGGAGGT GGACTGTTGG TCGCAGCCGT CATCAAATAT GCCGACAACG TTCTCAAGGG GTTGGCGACG GGTGTAAGTG TTGTATTTTC CACCTTCCTG TCGATTATAT GCTTCGGTAC TCCCTTGTCG AACCACTTTG TCGCCGGTGC GGCAATGATC TTGATCAGTG TGTACTTTTT CAGCAATCCA TTGCCGATGA AATCCAAGAA AGAAACTGAG ATGAAAAGTC TGATTCCTAA ATAGGTATCG AGGACCTAAA AGCTAGTTTT TTGCGATAGC TTGTGA
|
Protein sequence | MASFKLMLLV MMVLQNSSTV LVGRYTRSAV AKEDLYSVSH LIILTECSKF LLSCGLEFYT TGGQLYESLQ QHVFKRPTDA LKILVPALLY LVQNTLLYVA LSNLTAPIFQ VTYQAKLVTT ALVSVLLLQR SYSLQQWVCL CLLSFGVATV VLGEKSGAQD AKADLQQNLF VGLIAVTVAC MSSALAGVYF EMVLKKPSTG EDAQQPASLW MRNMQLAFFS IVIAVLQSST ETPKEEFIGK PYLHGFTPWV WTLVVLQAGG GLLVAAVIKY ADNVLKGLAT GVSVVFSTFL SIICFGTPLS NHFVAGAAMI LISVYFFSNP LPMKSKKETE MKSLIPK
|
| |