Gene PHATRDRAFT_22921 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_22921 
Symbol 
ID7195270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011688 
Strand
Start bp286716 
End bp287771 
Gene Length1056 bp 
Protein Length337 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183716 
Protein GI219126965 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.858448 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGTCGT TTAAGCTGAT GTTATTGGTC ATGATGGTGT TACAGAACTC ATCGACCGTC 
TTGGTTGGTC GTTACACACG ATCTGCCGTC GCAAAAGAGG ATCTCTACAG TGTTAGTCAC
CTAATCATCT TGACGGAATG CAGCAAATTT CTCCTTTCGT GCGGGCTGGA ATTCTACACC
ACTGGCGGGC AGCTCTATGA GTCGCTCCAG CAGCACGTAT TTAAGCGACC TACGGATGCA
CTGAAGATCC TTGTGCCGGC CTTATTGTAT CTGGTGCAGA ACACCCTTTT GTATGTCGCC
CTATCTAATC TGACGGCACC CATTTTTCAG GTCACCTACC AAGCGAAACT AGTCACAACG
GCTCTCGTCA GTGTTCTTTT GTTACAGAGG TCTTACAGCC TTCAACAGTG GGTCTGTCTT
TGTCTTCTTA GTTTTGGCGT TGCAACCGTT GTCTTGGGAG AAAAGTCCGG AGCACAGGAT
GCTAAGGCCG ACCTGCAGCA AAATCTGTTC GTCGGACTTA TAGCTGTAAC GGTTGCCTGT
ATGTCAAGTG CGCTTGCTGG GGTCTATTTC GAAATGGTTC TAAAAAAACC CAGTACAGGC
GAGGATGCTC AACAGCCCGC TTCATTGTGG ATGCGCAACA TGCAGCTCGC CTTTTTCTCT
ATTGTTATTG CCGTCCTCCA GTCTTCGACT GAGACCCCCA AGGAAGAGTT CATCGGAAAG
CCTTATCTAC ACGGCTTTAC TCCATGGGTG TGGACATTGG TGGTCTTGCA GGCCGGAGGT
GGACTGTTGG TCGCAGCCGT CATCAAATAT GCCGACAACG TTCTCAAGGG GTTGGCGACG
GGTGTAAGTG TTGTATTTTC CACCTTCCTG TCGATTATAT GCTTCGGTAC TCCCTTGTCG
AACCACTTTG TCGCCGGTGC GGCAATGATC TTGATCAGTG TGTACTTTTT CAGCAATCCA
TTGCCGATGA AATCCAAGAA AGAAACTGAG ATGAAAAGTC TGATTCCTAA ATAGGTATCG
AGGACCTAAA AGCTAGTTTT TTGCGATAGC TTGTGA
 
Protein sequence
MASFKLMLLV MMVLQNSSTV LVGRYTRSAV AKEDLYSVSH LIILTECSKF LLSCGLEFYT 
TGGQLYESLQ QHVFKRPTDA LKILVPALLY LVQNTLLYVA LSNLTAPIFQ VTYQAKLVTT
ALVSVLLLQR SYSLQQWVCL CLLSFGVATV VLGEKSGAQD AKADLQQNLF VGLIAVTVAC
MSSALAGVYF EMVLKKPSTG EDAQQPASLW MRNMQLAFFS IVIAVLQSST ETPKEEFIGK
PYLHGFTPWV WTLVVLQAGG GLLVAAVIKY ADNVLKGLAT GVSVVFSTFL SIICFGTPLS
NHFVAGAAMI LISVYFFSNP LPMKSKKETE MKSLIPK