Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_15627 |
Symbol | |
ID | 7195366 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011688 |
Strand | + |
Start bp | 118067 |
End bp | 119014 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002183553 |
Protein GI | 219126625 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.254802 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GGGGAGGAGG GTATCGATGC TGGCGGTGTT ACGAGGGAAT ACTTTCAGCT TTTGAGCGCT CAGCTTTTCG ACGTAAATAG CGGGATGTGG TCGAATCGGT TTGGCGATGA CAGCCGGATT ACTTGGTTCA ATTCGGATTG CATTTGGGAT GATGACGGAT ACTTTCTCGT TGGTGTTCTT GTCGGTCTCG CGCTTTACAA TAGTGTACTG CTGGATGTAC ACTTTCCCCA GGCAGTCTAC CGGAAGCTGC TTGGCTTGCC CCTGGGGCTA GAAGACATGG TCGACGAAGA GGTCAAGTCG GGCTTACAAC ACTTGTTGGA CTACAGCGAC GACGATGTGG AAGATGTGTT TTGCCTGACA TTCGACGTTG CGTGGACCGA CCTGGGGGAA GAAAAAAGGA AGGAACTAAA GCCCGGAGGT ATAGATACTC CCGTCACCTC TGACAACAAG GAAGAGTACG TGATCCTGTA CGTAAAATGG CTTCTGGTGG ACAGCATTTA CCCTCAATAC GAAGCTTTCG AAAGGGGGTT TATGCGCGTC ATGGAAAATT CTAGTTTGGA TCTTTTGCGT CCTCAAGATC TCGAATTGCT AGTTGTTGGA ACGCCCGAGC TGGACTTTAA TGCTCTCATG TCCAATACGC AGTACGAAGG CGGATACGAC TCGGAATCGG CTGTGGTTCG AAACTTCTGG AAGTTTGTTG AAGAGACTTC GCACGAGACA CGGCTGAATT TACTGAAATT TGCGACCGGA TCTTCGAAAG CCCCCATTGG AGGACTGGGG GAGCTTTCTT TCAAGATTCA AAAGTCGGGA CCCGACTCGG ACCAACTCCC TTCGTCCCAC ACCTGTTTCA ATACTTTGCT GTTGCCAGAC TATGGCGAGA ATTACAACAA ATTGGCAGTG CGTCTGGGAC GAGCTGTTAT TGAGTGTGAA GGGTTTGGAC TGCAGTAA
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Protein sequence | GEEGIDAGGV TREYFQLLSA QLFDVNSGMW SNRFGDDSRI TWFNSDCIWD DDGYFLVGVL VGLALYNSVL LDVHFPQAVY RKLLGLPLGL EDMVDEEVKS GLQHLLDYSD DDVEDVFCLT FDVAWTDLGE EKRKELKPGG IDTPVTSDNK EEYVILYVKW LLVDSIYPQY EAFERGFMRV MENSSLDLLR PQDLELLVVG TPELDFNALM SNTQYEGGYD SESAVVRNFW KFVEETSHET RLNLLKFATG SSKAPIGGLG ELSFKIQKSG PDSDQLPSSH TCFNTLLLPD YGENYNKLAV RLGRAVIECE GFGLQ
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