Gene PHATRDRAFT_48904 details

Gene Information

• Locus tag: PHATRDRAFT_48904
• ID: 7195177
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011687
• Strand: +
• Start bp: 643217
• End bp: 647480
• Gene Length: 4264 bp
• Protein Length: 417 aa
• GC content: 47%
• Product: predicted protein
• Protein accession: XP_002183398
• Protein GI: 219126299

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTTAACCAAT CCTTAGCATA ATCCAATCTG TCCGCTTTCC TGTTCCTGTG TTCCATTTTT 
AAGTCATCTT TAATCTTGCA CTTGTTGTGC TATCTACTTA AGAGATAGGA GTTGTGACTT 
GAAGCTTACG TACGCCTTGC GCTCTGTTTC CTTGGTTGTG GTATAGAGAA TTCACGCTAC 
CTTTTCGACT CCGGCATACA AAGCCCATGG TAGCCATGAG CAGCACCATC GGCACCAACA 
ACGGCCGAAG CACCGCTGGC ACTCCTATGC AGGAACCTGC AGTGGATCAA CGTAGACAGC 
CACAGTCCCC GTTTTCGTCT GCTCACTCAT CGAAATCAAG AAGACGTTCC TTTTCCGAGC 
AATTTGAGGA ATTTCCGAGT AAGCTTCAGT TTGCTGTCTT GGCCTGTGCT GTCTTTTTGT 
TCTTTGGCTT GCACAACTTC TTGCAAGAAG CCATTATGAA TGTTGAAGGC TTTCATCGGG 
GAGTCATGCT GGGATACACG GAAGTCTTGG GTGTCGCAGT TTGTTCTTAC TTGGAACGCA 
AGTTTCTACA GAACAAAGAA GAAGTGGAGC GTGTCGCTCC TCTATCAGCC TACCCCCTGC 
TCACTGCTTG CCTCATGACG AGTTCGGCTC TTTCCAATAT TTCACTCAAC TACATTAACT 
TTCCTACAAA GGTTGTCTTT CGCTCCTGTA AATTGTTACC CACAATGGCA ATTGCTTCAA 
TCATTCATCG AAAAATATTT TCCGCCACCG AGTATTCATG CGCCTTTGCT GTTTGCGCCG 
GTCTTGTCTT GTTCGCTGCA GCGGATTGGG AACTTGCACC GTCTTTTCAT CCTATCGGAC 
TAGTCTTGGT CACCTTATCC GTTTGTGCTG ACGCCATTCT ACCTAACGCA CAAGAACGAA 
TATTTCGACT CGGTGCGTCC CGACTCGAAG TCACATTCTA TACCAACATC TTTTCTCTCC 
TCGCCTACAC TACCACTACA CTTCTTTCGG GTGATTTGAC GGCCACCATT CGACTCGTAC 
TTCAGAATAG GCAATTGGCG GTATACTTTA CTGTCTATAC CTTGATTGCC TACGTGGCGA 
TTTCTGTACA TATGATGGTT GTAAAGCGCT TTGGTGGAGT GGCTGCAGTA TTGGTGGCAA 
CGGGTCGCAA AGGTATGACT CTCATTCTGA GTTTCCTCTT TTTCCCCAAA TCCTTCAGTT 
GGTTTTACCC CGCCGGAGCT TTCCTCGTAT TGGGAGGATT GCTTGTATCA ACTTTGGCCA 
AGCTGCGGGG GAAGTCGCAT CCTGCACAAC CAGCTTACGA TCAACACCAC GGTGCGAAAG 
GAACTTTGTC AACCTACCGG GGACTCAAGC AGCACGTCAG TGATATTGAA CTCGCCAGCG 
GCACCTCTAC GACGTTCTCT TCGCCCCCCT CTTCACCGCC CTCATCGTCA TATGTGCGAG 
ACGAGAAAGC CAGTCAATAG CCTCAATCGG ACGCAACCCG CCAGGCATGG ATATGGTACC 
ATACTCTAAA CTTTGAACAG AATCAATGCC CCAAACAAGA CCTTGCTCAT AGTGATGTCG 
CGGAGATCGC CATATTAAAA GAGTTTGGAT CTAATGTGTT GTCGCATAGG TGAGAGTTTT 
TGGGGAGCTT TCCTCGGGAA TAGTATCCAA AGCACCTCCC AAATGCCATG CAGCAAGTCT 
TATGATTCGA TGACTATAAC GGTGCCATGC GCACAATTGT TTTGCCGGCC ACTACAGCTC 
CGAATTCCCA CCCACGCCAG CCATTAGACA AAGCGCGTAA AGGATACTGC TTCATATAGT 
CGTTTTTGTC TGACTTTTGA TTTGTGGGCC CAAAGCAACA CATGAAATCT TGAATGGACA 
ATCTGTCACA ATGTTGTAAA CCGGGCAATG ATTCGGAATT AGACGAGACC AACGAAGTAA 
GTGGTAACAA TCGAACGCCA CGAAGGAGCA ATGAATCGTA GCATCACAGC TGTGCCCATT 
TTGAAGTCTG TTTCACACAT AGCTTTCCTT ATCATATCGA GCTCCGTCTT ACAATACAAG 
CGGTATCAAA ATAGGATGAC AACAAAGAGG ACAGCGGTCC CTACCTGGAA GGCTCAGAAG 
CCGGAAGTAC AGACAAGATA GCCTGGTAAA GCTGTTAGAT CTATTAACCT ACGAAAGGTG 
GGTGGGTGAT ACTTCGAGGC GAGATGTTAG TCTTTGACAC TTTACAAACA TTGTCTCAGA 
CTGATCCAAA AGAAGGGTCC ACTCGCGATG AGCAACGGTT TTGTTCGATT GAACTTGATT 
GACTGAATCA ATGATCAGAT TGTCGACGAG ATGCTGTCTA TCATGAGCTG ATATACAAGA 
TCGCTGCAGT CGTTAACATA GGTAGTACCG TAGCTCGTGG GAGCTTTTCT TTGTCAAGTT 
TCATGTGTGT AACGAAGAAG GCGCCAACGC TCTTTTCGCT AGCGACTGGT GGGGACTGTG 
TCCGTGAATT CCTCCCAAGC TATGGATTTT TCACCAAGGC CCTAAGCCCG GTTGTAATTA 
TACAACTGAT CGTTGCCACC CCTTTCAGAA GCTATGATTT ATCTTGCAAA GACTTCGCTG 
TAAAGAGTGC TGCTGAGGAG CAAAGGTCTA TTGCGTTTTC TCACAAATTT ATCAGATCGC 
GTATCACTCA ACACCCAAAT GGTGCTTCCG CGAACAAGAA GCACCGTCAA TCATGATCTT 
GGATTGCCTA CATTGCTAAC CACTCCTTTC AGTCTTTTTT ATACAATTTT TGTAGCCAAG 
CATGATAGCG CTAGCCTGGA GCTACAAATC GTTTTCCGGA AGCAGAATGG CAGAAACAAA 
GGGCTGGAGC ACTCCATTGG AAAATGTCTT ACAATTAGTA CAGATGTCGA GTATCAACAT 
TACATACCTT TGAGTCCGTA TATCTCTTGA AGGAACGGAG GAAGTCTATT GGTCGGACGA 
CGTGTATTGG CATCCAAGTG CATGATATCA ACAACTCCCT GGGCAATTCC AACATCATTC 
ACGAAGGCCG TTTGTCGACA CTCGAGCACC ATACCACGAC GTTTCGAGTT GACGACTGTT 
TTAACCGTAA CAGTTTTCTG CGCTCTGGCA ACTGGCAGAG ACCGAATGAA AGCATCCTCC 
GTCTTATCTA ACAGTAACAT ACAGTCGGAA ATGGTCGTCA CTACCAACAA AAGACTGTAT 
TCGTCCTTGA GACGCCGCAG CCCAGTAGGG CCACCCAAAA AATTACTGCG ACCGCGTTCA 
AAAAGATTGA GCACACTTCG CAGAGGTAAT GAGTTTGGGA GGTGTGGATC GTACTCGTCT 
CGAAAGGTGA CATACGTAGT GTTTGATATA ACCTCTTGGT TTCCTCTAAG CGGAATTTGC 
TGCGGCAAGG CCGCATGTAG AGCCCCAGGC CGAGCCAAAA CAACACCGTC TGCTGTGTTG 
TATATCGTAG AGCCATCTGG GCTCCTCATA ACGAGGTTCC ACACTTCCAC ATTTCCGACG 
TCTGGTGTCT CGATCAGAGT TGCGACAATA ATGTATTGGT CCCCCAAGGC GGGTGATGAC 
TTGAACTTTT GCTGACGAAC GCTCACAATT GACCAATCGA GGTGCTTCAG CAACGGAGTC 
TTGATGCCGA TGTTTTCGGG GATTGTCGAC GACGCAATAA CTCCGGCCTG CAAAGCGCGA 
TCAAAAGCAC GGAGGTAGTT TGCGTTGTAC AAAACGCCGT ACGCGTCGGT ATCTTCAATG 
TACACCGGAG TCGGCTCGGA CACAATTACT ACACGTTGCG ATTCCATATC CGAAGTAGGC 
TCTCCAGAAT TCTCGCCCTT GTGCATCGAA TCTGTTGACA TTGTTCGAAG TGAAGCACAA 
GCCGGTATCG GTTCTTTCCG ATTTAACAAC ACGAAAGAAG ATGCGTCTTC GAAAAATATA 
AAAAGAAGAA TTCCGACAAA CATATACACC GTCAAAAACG TTACTCGTAC GAGTTTGCAC 
TCAGCCATTG TCTGCGCAAG CAAATATCAC TTTCAAATAG ACCGAAACAG GAATTTCGGG 
GGTAACCACC TCACCGCGAT GCGATGACGT CTCGGAGGGT CCCACTCTGA AATAGCAATA 
GGGTGCTCGT TGGCTGACGA AGGCTTGAAC AACCACGTTT CAAGGATCAC TTGGTTGAGG 
TTCGATCGCC ACTGGATGCT ACTCGATTTA CTATTGATGG TTTCCTACAA GATTGCTGCA 
GTAGTGTGTA GATTCAATAC ACAGACTGTG CTTGCCTGCT TCTCCTTGCA GTGATACCTC 
CACT 

 

Protein sequence

MVAMSSTIGT NNGRSTAGTP MQEPAVDQRR QPQSPFSSAH SSKSRRRSFS EQFEEFPSKL 
QFAVLACAVF LFFGLHNFLQ EAIMNVEGFH RGVMLGYTEV LGVAVCSYLE RKFLQNKEEV 
ERVAPLSAYP LLTACLMTSS ALSNISLNYI NFPTKVVFRS CKLLPTMAIA SIIHRKIFSA 
TEYSCAFAVC AGLVLFAAAD WELAPSFHPI GLVLVTLSVC ADAILPNAQE RIFRLGASRL 
EVTFYTNIFS LLAYTTTTLL SGDLTATIRL VLQNRQLAVY FTVYTLIAYV AISVHMMVVK 
RFGGVAAVLV ATGRKGMTLI LSFLFFPKSF SWFYPAGAFL VLGGLLVSTL AKLRGKSHPA 
QPAYDQHHGA KGTLSTYRGL KQHVSDIELA SGTSTTFSSP PSSPPSSSYV RDEKASQ