| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_48892 |
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| Symbol | |
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| ID | 7194968 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011687 |
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| Strand | + |
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| Start bp | 603147 |
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| End bp | 605012 |
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| Gene Length | 1866 bp |
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| Protein Length | 485 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002183390 |
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| Protein GI | 219126283 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.301331 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GGCTCATCAC TAATGCAACA CAAAACCCTT TGCTAGGATA TACGTATTCT TTGGATTCCG
TCAGGCATGA AGTCGTCAAC AGGGCTTGGG ATCGGAGTGG CGTTGCTCTA CGGCTGTACC
GCAGCAGTGG CGTTCACACC CACTCACTCT GCCACGATAC CACCGCCAAC GCATTCCTCT
CCAGCCTTGC AAGGGATATT GCCGAACTAT CGGGCATGCC AGATTCCCCA AGGCTGTCCA
AGTCTGGATA GGCTGCGTTC ACCTACACAG ACTTCGACGG CATTGCAGGC AGTGCCTGGC
GGCAGGAAAC ATGCAACCAC GTTGGCCGGT CGCCTTTGGC CCGCTATTCG AAAGTTCTAT
ATTACTCCAG CAAAATTCAA AGCCATCGTT GCTGCCGTTG TGCACATCAC CGATTGGCAA
GACATTATCT TGATAGGAAT CGTGGCCTAT GGTATAAATC CACTGGCTAG ACTGACCTTC
GATATGATGT CCGACGAAAA GAAAGAAAAG CGAACGTACT TTGATCGGAA GCGTTTTGGT
GTCGCTTCGA CCATTGCACA AATCGCTCGT GTTTCGCTGT CCGTCTACAT TTTCGACGTC
ATATGCGTGA TTTTGACAAC ACTGGATTTT GACTTTCCCA CGAAATGGAT GCTGCCACAG
GCCTATTCCA AGATTGCGTA CTCTACTTGG TTCTTACAGC ATTTCATTCT GTGGAAACGA
ATGGCACTGT GCAAATGGTT CAAGGTGGAT CCCGAAGACA TGGGCCGGAT CGAGCTCCTG
GATCGGGTTG TATCAGGTTT GGCAGGAGCT ACTTACAGCT TGTTTTTGTT TGATTGGTTG
TCGATAAGAA TGGGGTTTGC CAGTACGTAC GCGTGTTGCC TCTCGCTGTA CTTATTTACG
TCTGCTTGCT CACAATATAT CATTCTTTTC TTTCAACGTA CATACTACAT CACCTCAGTG
AAAGGTATCT TTGCTTTTGG CAGCGTCGGT ACTTTGGCAT TTACATTGGC GAGCCAGGGT
CTGGTAACAC AGCTCATTTC AGGACTTTTC TTGACGGCGA CGGACAAAAT GTACGTTGGC
GATGCCGTCC AATTTGGTGA CGGCACGTCG GGAAAGATTA TACGCATGGG ATGGATGAAC
ACTTTGATTC GTAACGGAGA CAACACAATT ACCAACGTCC CCAATGCCAT GCTCGCCAAC
CAAAAAATCA CCAACCTTTC CCGTCTACGC CAGTGTCAAG TCAAACAAGT GCTCCGTTTC
CATTATGATG ATGCCGATCT ACTGCCGGAA GTTCTCGAAT CGATCAAAAC CGAAATTAAA
CAATCGTGCC CCAAGCTAAT TGATGGAAAT CGTCCGTTCC GCGTATTCTG GACTGGTTAC
AACGAGGATC ACCTGGAAGT TATGGTCGAT ACGCATCACT CCATTGCTCC TATCGGTGAC
GCCTACTGGA TTAATCGCCA AAAAGTCCTT ATGGCTATCA ATCGCGCCGT TAAGAAGCAC
AACGTCGAAA TCGCGCAAAT GTACAGCTTT GCCACTTCGG GAAGTGAACC AAGCTGGCGC
GTGATTCCAA AGTCCACGAT GACGATTAAT CCCAAAAAGG AAAGCGCTTC GAAAGAATAG
TCGTTCATGA CGTCTGTTCT GGCGCCAAGC AAGGTTTCCG AAAGATTGCG CCATTCTAAT
ATTGATCGTT TCCATGGATC GATCCCATTT TTGACCACGC CAAGTGTGAG ACTCCTGGAA
ACCAGCAGTA GCTGCCCGTA CATGGGATAC TTTGCATCTT GACTATACTT CCATTGATAG
TCTAACCATT GTATTGTCAT GCAAGAGTTA GTCAAGCTAG CTAAGAAAAT AAGATTGCTT
CTCTAG
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| Protein sequence | MKSSTGLGIG VALLYGCTAA VAFTPTHSAT IPPPTHSSPA LQGILPNYRA CQIPQGCPSL
DRLRSPTQTS TALQAVPGGR KHATTLAGRL WPAIRKFYIT PAKFKAIVAA VVHITDWQDI
ILIGIVAYGI NPLARLTFDM MSDEKKEKRT YFDRKRFGVA STIAQIARVS LSVYIFDVIC
VILTTLDFDF PTKWMLPQAY SKIAYSTWFL QHFILWKRMA LCKWFKVDPE DMGRIELLDR
VVSGLAGATY SLFLFDWLSI RMGFAMKGIF AFGSVGTLAF TLASQGLVTQ LISGLFLTAT
DKMYVGDAVQ FGDGTSGKII RMGWMNTLIR NGDNTITNVP NAMLANQKIT NLSRLRQCQV
KQVLRFHYDD ADLLPEVLES IKTEIKQSCP KLIDGNRPFR VFWTGYNEDH LEVMVDTHHS
IAPIGDAYWI NRQKVLMAIN RAVKKHNVEI AQMYSFATSG SEPSWRVIPK STMTINPKKE
SASKE
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