| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_48723 |
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| Symbol | |
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| ID | 7194994 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011687 |
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| Strand | + |
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| Start bp | 56541 |
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| End bp | 58420 |
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| Gene Length | 1880 bp |
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| Protein Length | 542 aa |
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| Translation table | |
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| GC content | 50% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002183279 |
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| Protein GI | 219126051 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.187612 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CCTGCAATAG CTGGATCTTT CCAATTCCCA GTAACGGACA GTTCGCCATT GCCAAAAAGA
GATTGTTAAC GACGTGCTCA CAGCGCAGTG GCCTAGTCCT TTGTTCGCAT CACATACAAC
ACGAGTTGCA GCAAAGAATC ACTTCAAAGC GCTCAAAAAA ACCTTTGTCC CAACATGAGA
GTAGCTCATT TTCCTTTCGC GGATGGTCTT TTGTTGGTAC TTGGCGTGCT GTGGTGTACC
GATGGCGCCT TGGCGTTCAC CGCGGCTCCA TTGCACACTC AGTCGCACTT GGATTCAAAG
AATGGCGTCT TCGGGAACGG AAAACTGACT GACAATCGCT TTTTCGGCAA GGCCGATACA
GTTAGGCCCA TTAGCACTCC GCGCGGTTCG GCTGTGGGAA ACTTGAAGGC TTCCCCGTTG
GTCGCACTGC TCTCGTCACC ACTAGGTTCC GTTGGAGTGC TCGCCAGTAT CGTCTTGGTG
CACGAAATGG GACATTATCT GGCGGCTCGA AGTTTTGGTA TTTCCGTGGA AGAATTTAGC
ATCGGATTTG GCCCCAAGCT GTTGGGCTTT CGAGCCTTTG GGGACGAATT CAATTTACGA
GCGTTACCCC TGGGAGGCTA CGTCCGATTT CCCGAAAATT ACAACGCGAC ACGAGTCCGC
GAAATGGAAG AAGCGGCATA CTTAGCCGCA AAGGAGAATG GTGCGTTGGA AAAACCCGAC
GCTGCATCGG AAATACTGAA CATGGTAACC TTTGGAGCCG TCGAAGCTCG GCAGCAAAGG
GAAAAGGAGC AACAACTATT ACAACAAGTG GAAGAATTTA ACAACTTGCC GTTTTGGAAA
AAAATGGTCA AGACACCTCC GCAAAAGTCG CTTGATCGCG GAAACGTTGA GATTGAGTAT
TATGATGATC CTAAGCTTTT ACAGAATCGG CCGTGGCAAG AACGAGCTGT AGTCCTTAGC
GGAGGAGTGG TAAGTCTGGT TGCGCCACAC GTATATCTTT CGTCTCGACA ACGGGGAGTA
ACTCATTCTC TCTTGGATTG GAAAAGGTAT TTAATTTGCT CTTGAGTTTC TCGATCTACT
TCGGCCAAAT CAGCGTCGGG CCGGGACTTC CCCAACCTGT CTTTGATCGT GGAATCGTCA
TCAACGCGGC ACCAACTTCC AACGCAGCGG CGAGCGGTTT GCTTCGAAAA GGCGATATCG
TGTACGAGAT CAACGGCTCG CCAGTTTCTG TTTCGTCATC GCCGTCACCG TATGAGGCAC
AGAAATCTAT CAACGAATTT ATTGCCAAAA TTCGAACGGC ACCTGAAGGA CAGCCAATAA
AACTCGTTGT GAGGCATCCG AACGAAAAAG AACTGGTTAA TGTTGACGTC GTTCCCAAAA
AGTTGGACGC TGCTGGACCT CAAACCATTG GAGTTTTGCT CGCACCAAAC TACATCAAAT
CAGAAGTGTT ACGTACCGAC AACGTCGGGG AAGCTGCTTC GTTAGCATAC AAGTACGCTT
ATTCATTGAC GAGCCAAACG GCTGCGGGTC TGGGGTCCTT ATTTGGGGAT TTGTTTTCCG
GAAAAGCGGG CTCCTCCAGC AACCAAGTCT CGGGCCCTAT TGGCTTGATA CGTACAGGTT
CCGAAGTCGT CGCGACTCAA GATCTGACTA CCGTCTTATT GTTTGCCGCG GCCATCAGCA
TCAATTTGGG TGTTGTAAAT GCCCTCCCTT TGCCTGCGCT GGATGGCGGA CAGCTTCTCT
TCGTCATTGC TGAAGCACTT ACCGGACGTA AAGTCAATCA ACGATTACAG GAAGGAATTA
CTGGAGCGGC AGTTTTGCTG CTACTGCTTC TGAGCGTGGG TGCGGCCGTC GGCGATGTTT
CCTCTATTCT TGGACGGTAG
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| Protein sequence | MRVAHFPFAD GLLLVLGVLW CTDGALAFTA APLHTQSHLD SKNGVFGNGK LTDNRFFGKA
DTVRPISTPR GSAVGNLKAS PLVALLSSPL GSVGVLASIV LVHEMGHYLA ARSFGISVEE
FSIGFGPKLL GFRAFGDEFN LRALPLGGYV RFPENYNATR VREMEEAAYL AAKENGALEK
PDAASEILNM VTFGAVEARQ QREKEQQLLQ QVEEFNNLPF WKKMVKTPPQ KSLDRGNVEI
EYYDDPKLLQ NRPWQERAVV LSGGVVFNLL LSFSIYFGQI SVGPGLPQPV FDRGIVINAA
PTSNAAASGL LRKGDIVYEI NGSPVSVSSS PSPYEAQKSI NEFIAKIRTA PEGQPIKLVV
RHPNEKELVN VDVVPKKLDA AGPQTIGVLL APNYIKSEVL RTDNVGEAAS LAYKYAYSLT
SQTAAGLGSL FGDLFSGKAG SSSNQVSGPI GLIRTGSEVV ATQDLTTVLL FAAAISINLG
VVNALPLPAL DGGQLLFVIA EALTGRKVNQ RLQEGITGAA VLLLLLLSVG AAVGDVSSIL
GR
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