Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_39455 |
Symbol | |
ID | 7194958 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011687 |
Strand | - |
Start bp | 560715 |
End bp | 561449 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002183508 |
Protein GI | 219126529 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTAACA CTGACATCAC ATTCCTTTAC GTACTTTGTC TGCTTCTGGC CATTGCGGGC AGCCGTGTAG CCCGAGGTTT AATTGTGCCC TCAATTCCGG CAGCTCGTGC GAAAGGAGCA CCAAAGCAAT CGTTCCGCAT CTTGGATACA GCAAGAAGAT CCCTCGGGGA ACCCATTTGC GAATACAAGC AAGTAGAGAT AACAACTTCA CAAAAAGGAC CACCTCAGCA GAAGATTTCT GTGGAAGACT TGACGCCCAT CCTGCAAGAG TTGCTCCAAC ACAGTGGTCT GCAGCAGGGT GTCGTTAACG TGATAAGTCG GCATACTACC ACGGCGATTG TTCTGAATGA ACGCGAAGCG CGTCTCGCAC GAGATATGGA AGAATACTTT TTGCGATTGG CTCCACCGGA CGAGCGCTCC GATTCGGTCC ACCGTCAAAA GGGCGTCCGA TACTACCACA ACGACATTGA CCAGCGCCCC GATTCACAGG AGGAGACCCA GCGGTGCCGG GATAACGGTT GGGATATTGA TCAGCCTCAA TCGCTGCAGG CGTGGCGTGA TCAAGAACCG ATCAACGCAC ATTCCCATAT TCTCAGCATG CTGCTGGGCT CGTCGGAAAG TATACCGGTA GTGGATGGGG TTATGGTAAT TGGACAGTGG CAGTCTGTTT TGTTGGTAGA TTTGGACGGT CCTCGCGATC GTACCGTAGG CGTACAATTT CTAGGCTATT GCTAG
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Protein sequence | MRNTDITFLY VLCLLLAIAG SRVARGLIVP SIPAARAKGA PKQSFRILDT ARRSLGEPIC EYKQVEITTS QKGPPQQKIS VEDLTPILQE LLQHSGLQQG VVNVISRHTT TAIVLNEREA RLARDMEEYF LRLAPPDERS DSVHRQKGVR YYHNDIDQRP DSQEETQRCR DNGWDIDQPQ SLQAWRDQEP INAHSHILSM LLGSSESIPV VDGVMVIGQW QSVLLVDLDG PRDRTVGVQF LGYC
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