Gene PHATRDRAFT_39455 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_39455 
Symbol 
ID7194958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011687 
Strand
Start bp560715 
End bp561449 
Gene Length735 bp 
Protein Length244 aa 
Translation table 
GC content52% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183508 
Protein GI219126529 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTAACA CTGACATCAC ATTCCTTTAC GTACTTTGTC TGCTTCTGGC CATTGCGGGC 
AGCCGTGTAG CCCGAGGTTT AATTGTGCCC TCAATTCCGG CAGCTCGTGC GAAAGGAGCA
CCAAAGCAAT CGTTCCGCAT CTTGGATACA GCAAGAAGAT CCCTCGGGGA ACCCATTTGC
GAATACAAGC AAGTAGAGAT AACAACTTCA CAAAAAGGAC CACCTCAGCA GAAGATTTCT
GTGGAAGACT TGACGCCCAT CCTGCAAGAG TTGCTCCAAC ACAGTGGTCT GCAGCAGGGT
GTCGTTAACG TGATAAGTCG GCATACTACC ACGGCGATTG TTCTGAATGA ACGCGAAGCG
CGTCTCGCAC GAGATATGGA AGAATACTTT TTGCGATTGG CTCCACCGGA CGAGCGCTCC
GATTCGGTCC ACCGTCAAAA GGGCGTCCGA TACTACCACA ACGACATTGA CCAGCGCCCC
GATTCACAGG AGGAGACCCA GCGGTGCCGG GATAACGGTT GGGATATTGA TCAGCCTCAA
TCGCTGCAGG CGTGGCGTGA TCAAGAACCG ATCAACGCAC ATTCCCATAT TCTCAGCATG
CTGCTGGGCT CGTCGGAAAG TATACCGGTA GTGGATGGGG TTATGGTAAT TGGACAGTGG
CAGTCTGTTT TGTTGGTAGA TTTGGACGGT CCTCGCGATC GTACCGTAGG CGTACAATTT
CTAGGCTATT GCTAG
 
Protein sequence
MRNTDITFLY VLCLLLAIAG SRVARGLIVP SIPAARAKGA PKQSFRILDT ARRSLGEPIC 
EYKQVEITTS QKGPPQQKIS VEDLTPILQE LLQHSGLQQG VVNVISRHTT TAIVLNEREA
RLARDMEEYF LRLAPPDERS DSVHRQKGVR YYHNDIDQRP DSQEETQRCR DNGWDIDQPQ
SLQAWRDQEP INAHSHILSM LLGSSESIPV VDGVMVIGQW QSVLLVDLDG PRDRTVGVQF
LGYC