| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_48636 |
|---|
| Symbol | |
|---|
| ID | 7194837 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011686 |
|---|
| Strand | + |
|---|
| Start bp | 446393 |
|---|
| End bp | 447409 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 177 aa |
|---|
| Translation table | |
|---|
| GC content | 46% |
|---|
| IMG OID | |
|---|
| Product | glutathione peroxidase domain-containing protein |
|---|
| Protein accession | XP_002183098 |
|---|
| Protein GI | 219125671 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAACC TCTTTAAACG AGCATTCGGT AAAGTACACG ACGCCTCTAC ACGCTTGATC
TACGGAGTCG AACAAACGAC GCAAAAGATG AGTTTTTACA GCTGTGCGGA CAAGAGCATG
GACGGCGAGG CTGTGCCCAT GTCCAGCTTC GAAGGCAACG TTTGCCTGGT AGTGAACGTG
GCCTCGAAAT GAGGCTTGAC CAAAATGAAC TATACCCAAC TCCCGCAGCT TGTCGATGAG
TACGGAAGCC GCGGTTTAAA AATCCTCGCC TTTCCGTGTA ATCAGTTTGG CGGTCAGGAA
CCGGGATCCC CTGAGGAAAT CCTCGCGTTC GTTGCTAAAT ACGACAAGGA AATGGCAAAG
AAGCTCGTGT TCTTTGAGAA GGCCGACGTC AACGGAGCCA ACACTCGGGA AGTCTACTCT
TATTTGAAAA AGACCTGTCC GAATGAAGAC GGAACAACCG ATATTCGTTG GAACTTTGGT
AAGAGAAACA AGCGGAAAGC ATTGGGGAAA CTGGCAAACC AATGAATGTC TCTTGTTTTG
CTAACTGTAA ACCCTCGTTT TTCTTTTTCG AAAACAGCCA AATTCTTGGT GGATCACGAG
GGGAATGCTG TCAAGCGTTC CACAAACTCG CCTTTTGAAA TGAAGGACGA CATTGAAGCT
CTTTTGAAAA AGAAAGAAAG CTCGGCGTAG AGCGCGACCG AACTGCTTAT ATATATATAT
ATGGACACGG GTGTAAGTGG TGTATATTGC GCTCGCTTAT TTCCGCGATT CCTAGCGAAT
GACAGTATCT GGCTTTCAAC GCCAGATATT CGAACAGCAT CATGAGTGAC GAAAAGTCTA
TCGACGCAAT GTTCCCTCTT CGAGGGTACA TGGTATAGTT CACAACCCGT TTTGTGTCGA
TAATACTTTT TGATGTTCAC TTATGGCTAC GGGATCGTTG GAGTAGCGCA CGCAGACTTA
TGCAATGGAC TTCTGTTGTC CTTATCTTTT GATTTTTAAT GTAAAAGACG CGCAGCT
|
|---|
| Protein sequence | MSNLFKRAFG KVHDASTRLI YGVEQTTQKM SFYSCADKSM DGEAVPMSSF EGNVCLVLVD
EYGSRGLKIL AFPCNQFGGQ EPGSPEEILA FVAKYDKEMA KKLVFFEKAD VNGANTREVY
SYLKKTCPNE DGTTDIRWNF AKFLVDHEGN AVKRSTNSPF EMKDDIEALL KKKESSA
|
|---|
| |