Gene PHATRDRAFT_48600 details

Gene Information

• Locus tag: PHATRDRAFT_48600
• ID: 7194869
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011686
• Strand: -
• Start bp: 330850
• End bp: 333094
• Gene Length: 2245 bp
• Protein Length: 451 aa
• GC content: 48%
• Product: predicted protein
• Protein accession: XP_002183206
• Protein GI: 219125896

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.119225
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGAATCA CAAAAATGCA ATCAGAACAC CTACGTCTAT CCAAGACGAT CTTTACGACA 
TCCAAGACTA CCTTGCAACA AGGAGTACAT CTCGTTATGA AGGCACATAC TATTGGATTG 
ATTCTCCTCC AGACCACAAA CGCTTTTCTA TCGCCGTACG GTAGAATAAA AAACATGAAT 
TCAATTCCCG GAAGAGTCGA GACAGTTGAA AGCCTTCGCG GTGGCGCTCT CGAGGCGCTG 
CCCGCAGAGG TCGTCAACCT CCCCTCCACG GTAACTTCTC TCGTCACATC GTCGCTTCTG 
TCGGGACCTT ACGGGGTCGT AGCTTTGGCA GCAATTTCGG CCGCCGTTAT CTTGCCTCTT 
ACTCAAGTGA AGAATATGTA CGGAGTATCC GTTGGCTACG GCGGCTCTGT CGCGGCGATT 
GCCTACGTCT TGTTGCAAAC ATTTGTGCCC GCAAAAGGCG ACATTTCGCA CTTGCTACTT 
GGGTCTTCTT TGTTTTACGG AATCCGGCTC GCGTCGTTCT TGTTCGTGCG GGATGTGGCT 
GGATGGAAGC CTCCAGCATC CCGTGAAGAG CCTTCGCGGA TGAAGCGTGT TCCGTTCGCC 
CTGAGTTTGG CAATATTTTA CGGTCTGATG ACAACGCCTC TCTTGTACGC CATGCGCACT 
CCGTCAGCCG TGGGAACGTC GCTTCATAGA GTCAGTATGG TAGGGACTGG CATAGCCTGG 
GCTGGCGCTA TTTTGGAAGC CGTTGCGGAT GGACACAAAT TTCTCTCGAA ACTCAACGTC 
GATCCGAAGT CTAAAGCATT CACCGGTCCT TCGACGGGAG TCTACACAAT GACACGGCAT 
CCCAACTATT CCGGGGAGGT TCTATTTTGG GTAGGAACCT TCGTTGCGGG AGCGCCTTCG 
TTTGGAAAGT CTATAATCGC TTGGTTGTCG TCTACCGCCG GTTTGTACGG CATTGTATCA 
ATCATGAATG CTGCGACAAA GGGTTTGGAA AAGCGTCAGG GAGAAAAATA TGGTGGGCAG 
AAAGCGTACG AAACTTGGAA ATCTGATGTT CCCTACCCGC TCGTCCCGCT TATAAAGGCG 
TAAGCTATAC TTGATGTACC CTACCTACTA AGTATGGCTT TCAAAGAGTC AACGTGTCGT 
GTTTTACGCA AGCATTGACT AATTTATGAA ATCCGCACAA AGCGCACTTA ATCGTAAGTT 
GAGACACAAG GATAGGTGCT TTCATAACGT TATTTTTATT CCCTCAGTCA AAGCAAATAG 
CTTTGTTGGT CTATCAACTA CCTTACTACG TTTAGGTACC CACTTTCACC CCTTTTGGCA 
AGGGAAATAG GTGGGTAATT CCTCCGGATA TGGTTGTTAC CTTTCTTCGC ATAAATGTCT 
CTAGACAGCA AAGTGACTAC GACAGTGTCC TTGACGTACC TAATTAGCTG GCTGTAAAAA 
GGGAGAAGAA ATTACAGAAC ACGGATGATC AATCGCCAGC AGCGACGACC TTTTCAGTCA 
AAAAGATCGA CACGAAGCAT GGGATTCTTC ACCCATCACG TTCACAAAGT AGGAACCCTC 
TGTACGATAT TGGCATCTTT TGCATACAAC GATTCTCAGA CGAAGAGCAC CATGGGCGCT 
AACAAGCTTC GCATTCAGGT GCAGTACTGA GGTGGATGAG GTAACTCTTG CGAGAAATGG 
CAAAGCGATC TGGGTAACAA AGCCTTGACT TCGCCCGTAC CTCAGCTCGT CTTTCATATT 
GATTCCAATT TTAGGCTACG GTCGCTATTT TAACGGGTTG AAAGACTTTC TCTCCTCTCA 
ACCCTCCGTA GCGAATAAGA TTGAGCTAGT CGGTAAGGAA GATCCTACGG TGACGGGAAA 
TTTTGAGGTG TCCGTCGCAG CGACTGGGCA ACTTTTGCAT TCCAAGCGAC AGGCCGGCCA 
AGGAAAGGCG ACGTCCCCGG GCGAACGGGC GGCGATTTTG GAGCAAATAA AAGAGCTATT 
GGATGAAGAT GACTAGTATT TGGCGAAGAT GCTTCTCGAT GCCTATGTGT AATACTTCAG 
AAACGAGGCG GTATTCGTTT CGACCGATTG ATCGATGGAA TGACGAATTT GCGATTTCTC 
TAGCGAGGGG TCGGACATTC TGACGGAGAA AGCAAGTGAG AGGAATCAAA GACAGGTGCT 
TGTGAATACA TCGACGATAA GAACGATACT GGATTAGGAA ATTGGACGCC TCTAAAAATT 
TGCACTATTA CACGATTTTA CGTCT 

 

Protein sequence

MGITKMQSEH LRLSKTIFTT SKTTLQQGVH LVMKAHTIGL ILLQTTNAFL SPYGRIKNMN 
SIPGRVETVE SLRGGALEAL PAEVVNLPST VTSLVTSSLL SGPYGVVALA AISAAVILPL 
TQVKNMYGVS VGYGGSVAAI AYVLLQTFVP AKGDISHLLL GSSLFYGIRL ASFLFVRDVA 
GWKPPASREE PSRMKRVPFA LSLAIFYGLM TTPLLYAMRT PSAVGTSLHR VSMVGTGIAW 
AGAILEAVAD GHKFLSKLNV DPKSKAFTGP STGVYTMTRH PNYSGEVLFW VGTFVAGAPS 
FGKSIIAWLS STAGLYGIVS IMNAATKGLE KRQGEKYGGQ KAYETWKSDV PYPLVPLIKA 
YPLSPLLARE IGYGRYFNGL KDFLSSQPSV ANKIELVGKE DPTVTGNFEV SVAATGQLLH 
SKRQAGQGKA TSPGERAAIL EQIKELLDED D