Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_48512 |
Symbol | |
ID | 7194764 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011686 |
Strand | - |
Start bp | 57910 |
End bp | 59758 |
Gene Length | 1849 bp |
Protein Length | 517 aa |
Translation table | |
GC content | 53% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002183149 |
Protein GI | 219125776 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGTGATA CGAACTTTTT TGAATCTAGC GTGCGCCCTT CTGTTAGTTA AGTTTGTCGA GACTCTCAAG TCACGACGAT CGAACGATAG GGGAGATGGT ACAGTGAGTA GCGCGTGGAA TGGCCGAACA ACGGTATTTT CCGTCGGCCT ACCTATTTTC CAAGACCAAT CAATTCCAGT AACCCTCTTC CTTTACCAAA GCAGGGTCTT ATCGCGCAAA AGAACGCGCG ATCCGCTCCC TACGGTACTG CCGTGACGCC CACACTCCAT CCAGTCTTCC GTCGATCGCG GAGTTTTCTA CGTCCCGGGC ACTCGCGCAT TCCCGAGCCT CTCTCGCCCG ATCGCAGTCC ATCACAGCCG CGATCGTTAT CACGCTCACG GACGTGGGAC ATTCGGTTTC GTCGAGAGCG GTACAGCAAC CAAGTACACA ATCGCTTCCC TTTGCTCTTT TCTACCACTA TTACCAGTAT TGGAGTCTTG AATCAATCTA TAACTCTCTC TCTCGATAGA ATGGAGATGA TACCGCACGC AGTTGAGAAA GAGAGCCCAG ACGACGCTGC CGGCACGGGA AACGGGAGCC GCAGCAGCGT GGCTTCCGCG TTTGTTTCGG GGCATCGTGG TGTTGTGGTA GACGAGAACT CCGTCAACAT TGTTTTGGAT AGTGCTCGCA ACAATCAGCT TAACACGACG ACGACGAGTA GCGCTTCTGC TCCTGCAGAG ATCCTTCCCG AAGCGACGGA CGGCAGATGT TCGGAGGAGG AGGAAGAAGA AGATGACTAC GAATACGAAG ACGAGGAGGA TGCCGCCTTT ACCGGCTTTT TGGTAGATCA TCCGCTCGTC GCAGCCACCA ACGCAACTCC GACGGTATCC GCTTCCAACG TGTCCTCGGG AGAATCTTCC GATGCTGCGG TAGCTCCTGC GACAATCCAG GACGAGGAAG AACCAGCGGA CGCGAAGCAG CGCTGGCGGG AACCCTCGAA AGATGCCGTG AAAATGAGTC TCCGGGCGGA AAAGGAAACT TCTGGGGGCA AGCGGCGCCT CGCACAAGAT CTGTACCGTA TCATGAATCA GGATACCAAT AAGGCAGGCT TCTCCTTAAA ACCCTCCAAG GAAGACTCCA TGGAACGTTG GACAATCAAG CTTTTCAAGT TTGACGAAGA CAGCAACCTC GCGAAAGATA TGCTCGTCTT GGGCTTGGAA CACATTGAGC TCGAGATGTC CTTTCCGGAA CAGTATCCCT TTGAACCTCC CTTCGTCAGG GTGTCTCGCC CACGTTTCAA GCGACAAACG GGCTTTGTCA TGAACGGGGC CCTTTGCATG GAGTTACTCA CAAACGAAGG TTGGAATCCC ATTAATGATA TCGAATCCGT GATTGTTTCC GTACGATCAC TCTTGGTGGT TGGCGACGGC CGACTCGAGG CCGCCTGCAA CCTTGCCGAC GCCAAGTATC GTTCTCTTCT TGATGCGGCT GTAGAAAGTC AATCGCCAAA GCAGGAAGCT TCGGCGACCG CCAGCGATAA TGCTTCAGCG TCCAAGCGAT TACGCAAAAA CTCCGAAGGA GACATCGCCG TTATACCCGA AGCGCGGCGT CGAATCGTGA GCGACCAAGG TGGATCTTAT TCTGTATCGG AAGCACAGTC TGCTTACTCG CACCTGTCCG ATTACCACAA GAAAAAGGGC TGGGATACGT CGGGTTGGTG GGCTCGCAAG GGATGAAACC AGACTGGAAG AATTCTCAGG CAGCTAGGAG CTCCCATACG CTTTATACTT TCAACTGCAT CTTAGAGCAG CAACAACACG TATATACCTG ACGGAAACAC TAATGAAAAT AGTAGATTTT ATACCGTCG
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Protein sequence | MCDTNFFESS VRPSGLIAQK NARSAPYGTA VTPTLHPVFR RSRSFLRPGH SRIPEPLSPD RSPSQPRSLS RSRTWDIRFR RERYSNQVHN RFPLLFSTTI TSIGVLNQSI TLSLDRMEMI PHAVEKESPD DAAGTGNGSR SSVASAFVSG HRGVVVDENS VNIVLDSARN NQLNTTTTSS ASAPAEILPE ATDGRCSEEE EEEDDYEYED EEDAAFTGFL VDHPLVAATN ATPTVSASNV SSGESSDAAV APATIQDEEE PADAKQRWRE PSKDAVKMSL RAEKETSGGK RRLAQDLYRI MNQDTNKAGF SLKPSKEDSM ERWTIKLFKF DEDSNLAKDM LVLGLEHIEL EMSFPEQYPF EPPFVRVSRP RFKRQTGFVM NGALCMELLT NEGWNPINDI ESVIVSVRSL LVVGDGRLEA ACNLADAKYR SLLDAAVESQ SPKQEASATA SDNASASKRL RKNSEGDIAV IPEARRRIVS DQGGSYSVSE AQSAYSHLSD YHKKKGWDTS GWWARKG
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