Gene PHATRDRAFT_38985 details

Gene Information

• Locus tag: PHATRDRAFT_38985
• ID: 7194696
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011686
• Strand: +
• Start bp: 39921
• End bp: 40685
• Gene Length: 765 bp
• Protein Length: 254 aa
• GC content: 52%
• Product: predicted protein
• Protein accession: XP_002183017
• Protein GI: 219125502

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTGACCA CGGAACCTTT TTATGGGCTG CCACGGTCCC AAGCTTCGAA AGATTGCGAG 
ACCGATACCG CGTCAGCCCG ATTCGCTTTG CTTTTGAGGC ATGCCGCAAC CGCTCTGCGT 
GATCCTACTC GCGCCGACTC CGTTGCAGCT GTGGGAGAAC TGACGGGGAC GTTGGCGCTC 
CAACGCATGC ATCAGGCCAT GAAAGGTGAT CCCGTCGGTA GACAAATTCT GAAAGACCGT 
CCAATTGTCT CGAAAGCTAG TATACCGTAC GAACGGTTGA TTGATGAAGC CAAAACTGCT 
GATTTATCGG CCGATACGGT GACGTTTGGT CAGGCCTACG GCATTTTTTT GAAAACCCAT 
GACTTTGATC CGGACGGACG GGATAAGGTT CGTTACGTTG AGGACGAAGA ATTGGCGTAC 
GTCATGCTTC GGTACCGTCA ATGCCACGAT TTCTGGCACG CCTTGACGCA GCTACCACCG 
ACCGTCGTGG GCGAGCTTGG CTTGAAGTGG TTGGAGCTGT TTCAGACCGG CCTACCGCTA 
GCAGCGTTTG CGAGTACTGT AGGCTCTTTT CAGTTGAGTC AGCAGGAGCA GCAAATACTG 
TGGATCCATT ATTTGCCTTG GGCAAAACGA ATAGGGCGGC AGCTTCCCTA CTGTGCTTTG 
ATGAACGTGT ATTACGAAAC AGAGTGGGAC ACTCCCTTGA ACAAGTTACG AAAAAGACTC 
CATATCGAGC AGGCTCCAGA AATACCAAGC GTAGATCAAA ATTAG 

 

Protein sequence

MVTTEPFYGL PRSQASKDCE TDTASARFAL LLRHAATALR DPTRADSVAA VGELTGTLAL 
QRMHQAMKGD PVGRQILKDR PIVSKASIPY ERLIDEAKTA DLSADTVTFG QAYGIFLKTH 
DFDPDGRDKV RYVEDEELAY VMLRYRQCHD FWHALTQLPP TVVGELGLKW LELFQTGLPL 
AAFASTVGSF QLSQQEQQIL WIHYLPWAKR IGRQLPYCAL MNVYYETEWD TPLNKLRKRL 
HIEQAPEIPS VDQN