Gene PHATRDRAFT_5527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_5527 
Symbol 
ID7203709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011685 
Strand
Start bp642214 
End bp642723 
Gene Length510 bp 
Protein Length170 aa 
Translation table 
GC content53% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182878 
Protein GI219125208 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.305433 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATTGTGCTGG TCGCCTTGGC GCGCCCTCAT GTGAAAAACG CCTTCAACAA CGATGTGTAC 
GAAGATTTAA TTGAAATTCT CCATTGGACA TCCCGTGATC CTTCAGTTGC CGCCGTTGTT
CTCACCGGCT CTGGATCGTA CTTTAGCAGC GGTGCGGATC TCAAAGGCGG TACCTTCGAG
CCCGAACCGC GGGGACGCCA AACAATCCAC AAACCCGCCG GACGCTTCAT GATGAGCGTG
ATTGCTTATC CCAAGATACT GGCCGCAGCC GTCAATGGTC CGGCGGTAGG GATTGCAACC
ACAACCTTGA TGCATTGTGA TTTGGTATAT TGTTCGCCAA CGGCAACGTT CTGGGCTCCC
TTTACCCGGC TGGCGCTCGT ACCAGAGCTC TGCTCTTCAG CGACCTTTAT GGCCACCATG
GGTCTTTCCA AAGCCAACGA ACTTTTATTG ATGGGAAAGA AAATTGACGC CCTAACTGCA
GTCCAATGGA ACCTGTGCTC CCAAATCGTG
 
Protein sequence
IVLVALARPH VKNAFNNDVY EDLIEILHWT SRDPSVAAVV LTGSGSYFSS GADLKGGTFE 
PEPRGRQTIH KPAGRFMMSV IAYPKILAAA VNGPAVGIAT TTLMHCDLVY CSPTATFWAP
FTRLALVPEL CSSATFMATM GLSKANELLL MGKKIDALTA VQWNLCSQIV