Gene PHATRDRAFT_54915 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_54915 
SymbolCysK 
ID7203770 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011685 
Strand
Start bp650306 
End bp651610 
Gene Length1305 bp 
Protein Length356 aa 
Translation table 
GC content52% 
IMG OID 
Producteukaryotic cysteine synthase 
Protein accessionXP_002182880 
Protein GI219125212 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.1729 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTATCAAAAT CAAGTCCCTG GATTGGAGTA GCCGCCTTGA CTGTGGGATC GGCAACCCTT 
GGATGGTGCT GGATTGTTCG CCTTAGGCGA ACGCAACAAC GTTCGCAGAT GAACGACATC
GCAATTGTAT CTGCCTACGA AGCTTTAATT GGGAACACGC CGTTAGTGAA GCTCTCCACG
TTATCAAGGC TAGTGGGACG ATCAGTGTAC GTCAAAATGG AGAGTTTGAA TCCGGGTGGC
ACTGGAAAAG ACCGGGCTGC CTTGGGTATG ATCAGGGCCG CGGAAGCTTC GGGATATCTG
CCGAAAGGCG GCAACGGCAC AAAATCCACT GGAAATTCCG CTCCTGTGGA GAGAGAATCA
AGCGATCCAT TCGACAGCAT TATTTCAAAA GCTATGAGAC GATCCAAAAC GGGTGGATTG
GTGGTGGAAG GAACCTCCGG ATCTACCGGA ATTGCCTTGG CTAGCTTATG CCAGCGCCGA
GGCCACGCCT GTGTCGTGGT CCTACCAGAC GACCAAGCGT CTGAAAAGCA AAGGATTCTG
GAAGCTCTTG GTGCGGAAAC GTACGTTGTG TCCAACGCAG CCATTGCCAA TCCCAATCAC
TACGTAAATG TCGCAAGACG GCTGGCTGTC CGCGCCAACG AGTTGGGCAC GGTTCGCGCA
GTCTTTATCG ATCAGTTTGA GAACGTGTCC AATTTTGATA CGCATTATGA ACAAACTGGA
CCCGAATTGT GGAGGCAATG CAAAAATTTG GACGCGTTCG TCATGTCGTC CGGTACGGGA
GGGACGATTG CCGGAATCGG TCGATTTTTA AAGGAAAAAC ACGTTTCAGT CAAAGTTGTC
TTGGTCGATC CACCGGGTAG CGCATTGTAC CACAAGATCC AACATGGTGT GGCCTTCGCA
AACCAGCAAC GTGAGCGTGA ATTGAAGCGC CATAGGTACG ATACACTCGC TGAAGGAATC
GGTCTTGACC GAGTGACAAA CAACCTGGCC TTGGGAGTTG ACTTCATCGA TTCGGCCATC
CGCGTCATGG ATCAAGAGGC AGTTGATATG GCTCACTGGC TACTTGCAAA CGAAGGGCTG
TGGGTCGGGT CAAGCTCGGC TATGAACGTG GTAGGAGCCG TACGGGTAGC GTTGCAGCTA
CCATCAAAGT CAACTATCGT CACGATCATT TGCGACGCTG GTCAACGGCA CGTGACGCGT
TTTTGGAATC GAGACTTTAT CCTTTCTAGG GGTCTGGAAT GGCCTGGTGA TTGCGAACGT
ATACCGGGAT GCATTCAAAA CATAGAAGGT TCAGCAGCTC TCTAG
 
Protein sequence
MNDIAIVSAY EALIGNTPLV KLSTLSRLVG RSVYVKMESL NPGGTGKDRA ALAMRRSKTG 
GLVVEGTSGS TGIALASLCQ RRGHACVVVL PDDQASEKQR ILEALGAETY VVSNAAIANP
NHYVNVARRL AVRANELGTV RAVFIDQFEN VSNFDTHYEQ TGPELWRQCK NLDAFVMSSG
TGGTIAGIGR FLKEKHVSVK VVLVDPPGSA LYHKIQHGVA FANQQREREL KRHRYDTLAE
GIGLDRVTNN LALGVDFIDS AIRVMDQEAV DMAHWLLANE GLWVGSSSAM NVVGAVRVAL
QLPSKSTIVT IICDAGQRHV TRFWNRDFIL SRGLEWPGDC ERIPGCIQNI EGSAAL