Gene PHATRDRAFT_52412 details

Gene Information

• Locus tag: PHATRDRAFT_52412
• ID: 7203690
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011685
• Strand: -
• Start bp: 552282
• End bp: 554474
• Gene Length: 2193 bp
• Protein Length: 693 aa
• GC content: 51%
• Product: channel voltage activated chloride channel
• Protein accession: XP_002182982
• Protein GI: 219125424

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTTACG ACGTCGGCCT CGATGATGGA GCTACTCAAG CCGACGAGGA TCCCTCGGCA 
TCTGCTGGTA CAACGGAGTG GGTTGCTGCC TTTCTTGCCT TTGCCGCCTA CCAAACCTTT 
TTTGCTGCCA TTGCTTCTCT GTTCGTCTGG TGGGAACCGG TCTCGGGAGG ATCTGGTATT 
CCTGAAATCA AATGCTTTCT CAACGGCATT GATCTTCCGC GCGTCGTACG GGTCAAAACG 
TTGTTGTGCA AAGTTGTCGG CGTGACCTTT TCCGTCGCTG CCGGATTGCC CGTCGGGAAA 
GAAGGTCCCA TGGTCCATTC CGGTGCCGTC GTCGCCGCCG GTATTTCGCA AGGCAAGACG 
CGCTTCTGGG GCGTCGACAC GAGTTTTTCC AAATTCAGTG ACTTCCGAAA CGATCGGGAA 
AAACGTGATT TCGTCGCCTG CGGCGCTGCC GCTGGGGTTT GTTCGGCTTT TGGTGCCCCC 
ATTGGTGGTG TTCTATTTAG TCTGGAAGAA GGAGCGTCGT ACTGGAGTAC CAAGCTGACT 
TGGCGGGCTT TTTTCTGTGC CATGACCACT TTGGCCACGC TTTTTTGGGT CCGCAATATG 
GATACCTTGT GGGTGAGTTG CCCCGAACCT TCGGATCGCG TTAGCCGGAA TATGTTTGTG 
TGGTCCGTTC ACTGACGCAC CAGTTCTTTC ATCCTTTTCC CAGGGCCAAG CCAATATTGA 
CAAGCTCTTT TCCTTTGGGG AATTCAACAT TCTCTCGGGA GAGTCTTCGA ACTTTTCGAT 
TTGGGAACTG GGGTTGTTTG TGATTGTGGG CTGTTTGGGT GGACTGATTG GGGCAGTTTT 
CAATGCTGCC AATGAGCATT TGACCATTTG GCGCATGAAA CGTATCAATC ATTCCAAGTT 
TCGTAGGTTT CTGGAAGTCA TTGTGGTTAG TCTGATAGTG TCGGTTGTTT CGTTTTTGAT 
GCCCCTTCTC TGGGGGCACT GTACCAAGAT TCCTAAAGAT ATGCAAGAAT GGACTAATCA 
GGAAAAGAAC TTAATTGAAG AACTCATCCC CTTCGGTTGC ACACCAGGAA AGGAATACAA 
CGAAGTAGCC AGCTTGATTT TCACCGAGGC GGATACCGCG ATTAAGCAAC TGTTCCATTT 
CCGTGAAGCA GGTGCCGATG ACTCGAGTAC ATTTTCGTCC GGTGCCCTCT TTTTATTTTT 
TGTCCCCTAC ATTCTCACAG CCACCTTAAC ATACGGTATT GCCGTACCAT CAGGGCTTTT 
TGTCCCTTCG CTTTTGTCGG GGGCTGCATT TGGACGCTTG TTTGGTCATC TCTTACACAA 
GCTAGATCAC ACAAACGGAA CGTTTGCCGA TTCTGGGACG TATGCTCTCA TGGGCGCGGC 
GGCTGTATTG GGAGGTATGG CACGAATGAC AATCTCGTTG ACAGTTATTC TTTTGGAAGC 
AACCGGTGAT ATGCAGTATG TGTTGCCCCT CATGTTGACA TTAATGGCCG CACGGTTTAC 
GGGCAACGTG TTTAATGAAG GTCTCTACGA CATTCATATT AAGCTCAAGA AAATCCCGTT 
TCTGGAACCC GACGTCCCTC CCATCGCTGA ACGCAACGAA ATTGTGGCCG GTCAGGTCAT 
GTCCACCCAA GTCAAATGCT TACGCCCCGT CGAGCGCGCT GGTGTCGTTT ATGATTTGCT 
TCGAAGCTGT GGTCACGGAA GTTTCCCAAT TGTCGACACT GCTAGCGGTG GTACACTGTA 
CGGAACCGCC AGTCGGTATA TGTTGTGTAC ATTGTTGCAG CGGCGTGCCT TTGGTTCACC 
GGATGTCTTG GAGGATTACG ACGGACCTCA GCAGCATTTG GGACCGAGAC GTTTGAGTCC 
ACTCGTGCAA TGGGACACTA TAGAAAGAGC TTATCCTAGA TATCCGAAGT TGTCAGACGT 
TGACATGAGA GAAGGCGACC GCAATTGCTG GCTCGACTTG CGGCCGTATG CTAACACTGC 
GCCCTACACA GTCAACGAGA CGGCTTCTAT TCAACGCACC TATCGGCTAT TCCGTACTCT 
GGGACTACGC TTTCTTTGCG TCGTGAACCA CAACAATCAA GTTGTTGGTA TCATCACACG 
AAAGGATCTT CTTCCTGAAG CATTAACCGA TTCACTGCTA CGCGGTCGTC TATCGCACGA 
GGAGGCCGAC GAGGATGGAC GAGGAATGCT TTG 

 

Protein sequence

MFYDVGLDDG ATQADEDPSA SAGTTEWVAA FLAFAAYQTF FAAIASLFVW WEPVSGGSGI 
PEIKCFLNGI DLPRVVRVKT LLCKVVGVTF SVAAGLPVGK EGPMVHSGAV VAAGISQGKT 
RFWGVDTSFS KFSDFRNDRE KRDFVACGAA AGVCSAFGAP IGGVLFSLEE GASYWSTKLT 
WRAFFCAMTT LATLFWVRNM DTLWLFSFGE FNILSGESSN FSIWELGLFV IVGCLGGLIG 
AVFNAANEHL TIWRMKRINH SKFRRFLEVI VVSLIVSVVS FLMPLLWGHC TKIPKDMQEW 
TNQEKNLIEE LIPFGCTPGK EYNEVASLIF TEADTAIKQL FHFREAGADD SSTFSSGALF 
LFFVPYILTA TLTYGIAVPS GLFVPSLLSG AAFGRLFGHL LHKLDHTNGT FADSGTYALM 
GAAAVLGGMA RMTISLTVIL LEATGDMQYV LPLMLTLMAA RFTGNVFNEG LYDIHIKLKK 
IPFLEPDVPP IAERNEIVAG QVMSTQVKCL RPVERAGVVY DLLRSCGHGS FPIVDTASGG 
TLYGTASRYM LCTLLQRRAF GSPDVLEDYD GPQQHLGPRR LSPLVQWDTI ERAYPRYPKL 
SDVDMREGDR NCWLDLRPYA NTAPYTVNET ASIQRTYRLF RTLGLRFLCV VNHNNQVVGI 
ITRKDLLPEA LTDSLLRGRL SHEEADEDGR GML