Gene PHATRDRAFT_48473 details

Gene Information

• Locus tag: PHATRDRAFT_48473
• ID: 7203700
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011685
• Strand: +
• Start bp: 597329
• End bp: 599885
• Gene Length: 2557 bp
• Protein Length: 343 aa
• GC content: 48%
• Product: predicted protein
• Protein accession: XP_002182869
• Protein GI: 219125189

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACACAAA AACAGCCGAC TCGCTTTTCA GAAGGAGGAG TAGAGGAAAC GAGTGATGGC 
GATTGGATCA GTGATCACGC CCTCTCGCTA CGTCGAGCGC TCCAGTATTG TCAGGAGCAA 
ATGGAATGGG ATAACGCACG AAAAGACGGA TATAATACCG ACTCCGACTT ACACACCCAC 
AGACTTTCTT TCCGCGAGGA GTTTCGAGGC ACGGATCATA GGGAAGAGGT CCGGAACCAC 
GCACAAGAGA ATTTCTGGAA GCAACATTGT GGTTCGTTTC GCAATGCCGG AACGAGCCCC 
ACGATCGATG TCGTACACGC GGATGAAATC ACACCACTCA AATTTATCAA ACATTATCAG 
CTCAAAAACA TTCCCTGTAT GATATACGGT TTGGATAAGA CGTGTTTTAA GCAGGTATCT 
GAACAGTGGG GTGGCAAACG CGGGTGCTCC AACGGCGATC GCTGAAGCAA ATGTTGTTCT 
TTTATTTCTC GTGATTGGTT TCACAACGTT GTAGGTTCGC GAACACTGGT ACCGGTAAAA 
TATCAACCCG CGTTTAGCCA TGGCTCAGAG GCGAACGGGT TAGATGAGGA TGGCCGCGCG 
ACGGAATGCG CAACAAAGCA AATGCCCCTC GAGGAATATC TACAGCTCCT GAACGACAAT 
ACTACGTCCC ATTGTCAGGG AAATGAAGAA AGCTACGCGA GATCCTCTTT CTGTTCGTAT 
TATTTGAAAG ACTGGCATTT GCAAACATGG CTGGAGATGA ATCATCCAGC TTTACATCCA 
TTGTATGAGG TCCCCGAACT ATTTGAAACG GACGTGCTGA ATCGGTTTCT TACTCGGTTT 
ACAGCAGGTG ACTATCGATT CGTATACTGG GGGCCTGCCG CATCCGTGAC TACACCGCAT 
GCGGATGTGT TGAATTCCTT TTCCTGGAGT TTCAACGTAC GGGGTGTCAA AATTTGGACT 
TTCTATCCAC CCTCCTGTCT ACCCAATTTT CAGGGACGCG AACTTCGCGT TCGACAAGAG 
ATGGGAACGT GCGTTTTTGT TCCAGCTGGA TGGAAACACG AGGTTTTCAA CGAAGAAGAA 
ACCATATCCA TCAATCACAA TTGGATCACA AGTGCCAACG TTGATTTAAC TTGGACCGTG 
GTGCGACAAG AATTAGAAGC TGTCGAGCAG GAGCTGCGAG CTTGGGGAAT CGACGATTGG 
GAGGCGAGGG AATCAATGCT GCGCGGTTGT ATTGGGCTCG ATGTTTCGTC ATTTTGCTTC 
ATGATTCTGT GTCGGTTGGT CGAGCTGCGA CAAAACAAAA GCGAATTGGC GGATGACCAT 
TTGGCAGCCT TGGAGATTTC GAGCCTTCGG TCTGCCCTCT TCGTCGTACT TGAAGATGAT 
TCACAGTTAA TCGAGCTACA AGCCAGATTT GCTGCTTCCT TTGCATCAAC TGAATTGGGG 
TGTATAGCTA TAAATATGGT AAAGCAGATG ATCTCAGGGA AAAAAACAAC GGAGCAGTGA 
TTCTGTGAGA GCACCTCAGG TCATTTATGG ATTTACCGAC CGTTTGACTT TTTTCGGGCT 
GTTCTGCGCT CGCTTCGCCG ATGTAGCATT AGAAGATCTT CCAGTGCATC ATCATCTAAC 
TTGAGAAGCT CAGTCAAAAG CTCTTGTCGT CGTCCCACTG CATCAGATAT TTGGTCGGAT 
CTGTCATCGG AAGCGGCTGT TGTACTGAAA CATGAGTACC GCGAGGATTT CTTCGCAATC 
TTTACAATCT GTTTGTTGAC AGCTCGGCAC CTTAAAAAAG AATTGGCTTC TGGTTTGACA 
CCCAATGCAG TTTCCAAGGG TTTGAGATCC TTCAAAAATA GTAAAATTCG AAGCCGAACG 
TTCTCCGGAA GCTCGGCGAG ATTGCGCAAG GATAGACTTT TGTCATAAAA AATGCTTGGA 
TTGGTCGGGA TCCCATAGGC AAATCCTACG CGCTCCAGCA TAGTCTCGAA GAAGGCACCA 
CTTCTTGAAG AGCTCTCTCC GTTTAGGATA GTTAATGGAA GCTGCAAATC GATGAGGGGC 
TCCATGCGAA TGTGACCACC GTCGACCCGT AATTTGTACT TCATCAACGA ATCTCTTTTA 
GTCTGCTCTA CAAGCTCTGG ACTCTTTTCA GTATCGGCAG TGATACTTGC CTTCGATGGC 
CCGAGTACTA CAGCCTTTGC CTCTTCGACG ACTGCCAAAA TGGCGTTTTT GATCCCCCAA 
GAAGTGCCAA CTGAGATCGC ACCGACACGA ATACTTGCGT GCGACTGCCT AGAATCGACA 
GCAATCCCAG GCTGAAAGAG AGCAATGTAG CGTACTTGCA ACGCGTGACG CTCTCGCGAT 
TCGTAGGCGA GTGTTTCGAG TGGCGGTGGG ACGTCAAGCA GTGCAGCAGC CGTGGAAGGC 
CACGGCGGTC TTTTGTGCTC TCCAGCTTCC GTGAGTAGAG TTTCAACCGT CATTTCATCA 
AAATCCACAA TTCGTTGCCG CAAGCCAACC GAAGCCAACT GTTTCTTTTC CATACCTTTG 
TATTCCCTCA TCACAAAATG GCCAACGTCG AATCTCA 

 

Protein sequence

MTQKQPTRFS EGGVEETSDG DWISDHALSL RRALQYLNSG VANAGAPTAI AEANVVLLFL 
VIGFTTFHGS EANGLDEDGR ATECATKQMP LEEYLQLLND NTTSHCQGNE ESYARSSFCS 
YYLKDWHLQT WLEMNHPALH PLYEVPELFE TDVLNRFLTR FTAGDYRFVY WGPAASVTTP 
HADVLNSFSW SFNVRGVKIW TFYPPSCLPN FQGRELRVRQ EMGTCVFVPA GWKHEVFNEE 
ETISINHNWI TSANVDLTWT VVRQELEAVE QELRAWGIDD WEARESMLRG CIGLDVSSFC 
FMILCRLVEL RQNKSELADD HLAALEISSL RSALFVVLED DSQ