Gene PHATRDRAFT_48336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_48336 
Symbol 
ID7203555 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011685 
Strand
Start bp149948 
End bp150857 
Gene Length910 bp 
Protein Length188 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182782 
Protein GI219125009 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ACCTTTCTAG GCAGAAGCTC TTTCATGGAG AATTTATAAA GTACCTGCAA GGACGAAAGA 
GGACATGGAC CGCATTCCAT GACATCGACG AGTATATTTC TGTTGACGAA CGAGTCGTTT
CCAATGCCAA AGAGCGTAGC TCCACGCCAG GAAGCGTAAT GCGTACGAAT CCCATTCCCG
ACGGCTGGAA CGAAAGCTGT GCTCCAGTAC CAAGGTGTCG ATTTTCAGCT GTGGAAAGCC
ACCCAGAAGA GGTGAGCGTG GGGGTCCCTT CTATAATCGG TGCAAACCAG CTCGAAACGC
TTCGCTGGAT GTATCGTTCA CAGAAAGGTC GTGACGGTCT ACCCAAGTCG ATAATTGATA
TTTCCCAGGT CCCCTTGCAC AAAGGTACTA ATTTGGCATT CATAGAGTTG TCAAAGGAAT
TTGTCCCAGG CAGAACTTTG AGCGCAGCTT TTTGGTGATA AATCACTACC TGGGTGACTG
GAACGTGTAG TACGTGTTGT TGTTGTTGTT GTTTTCGATG AGAGTCCTTG ACATAAGGGT
TACTGCTTTT TCGAAATTTG TGCCCACGCT GTTCCTTTCT GACCACTTCT TAGTCGTATT
GCTTTTCCAT TGCAGTTCCT TTCGAGATGA TAGCCGAAAG GGAGGCGAGA AAAGTAGGCA
AGTGTGGGAA TTCCGAACCA ACGAGACCGA GGGTGGCTCG GCTGATCAGA TCCGACCATG
GATTGGCGGC TTTGTTGCTG CCATGGGCGA AGAACGTGCT TTCCTTTTGT TGAAGGACGC
CGGGTTGCCA CAGAACTTCA AAGTTTTCAA CAAAAATGAA TGGAGAGTCA AAAAGTCTGC
TGTTCACTCT TATTTGAAAA ATGGGCTTGA TCCACAGCTC ATAGATTTTC TAGATCAGCA
CGCTGGTTAG
 
Protein sequence
MRTNPIPDGW NESCAPVPRC RFSAVESHPE EVSVGVPSII GANQLETLRW MYRSQKGRDG 
LPKVVKGICP RQNFERSFLV INHYLGDWNV YSFRDDSRKG GEKSRQVWEF RTNETEGGSA
DQIRPWIGGF VAAMGEERAF LLLKDAGLPQ NFKVFNKNEW RVKKSAVHSY LKNGLDPQLI
DFLDQHAG