Gene PHATRDRAFT_38886 details

Gene Information

• Locus tag: PHATRDRAFT_38886
• Symbol: APC8
• ID: 7203613
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011685
• Strand: +
• Start bp: 455684
• End bp: 457731
• Gene Length: 2048 bp
• Protein Length: 648 aa
• GC content: 56%
• Product: predicted protein
• Protein accession: XP_002182840
• Protein GI: 219125129

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGACCA CTGCCATTGC CCCCACGAGT CCTTTCTTGT CCCCGCATTC ACCGCGAGTG 
GAGCAGGCGC TGGAATGGAA CGTCCCACAA GTCCGGGTGG ACCTCCAACA GGCTTGTCGC 
GTCTTGTCGG ACCGGGGTCT CAAGCTCGCC GCCAAATGGG CAGCCGAGCA GTGGATGGGT 
CTACCTCCCT TTACCAAAGC GAAGACTCTT GGCGAATCGA CAGTGAATAA CGTCCGCGAA 
CCAGTTTTGG CACCGTCCGT GGTCGTGGAG GAGCTCGGGG ATGTCGAGGC AACGAACCCG 
CACGTCTACT ACGCCAAATC CTTGATGGAT TTGGGGGAGT ACGCACACGC CGCTGCGGTA 
CTCAGTGCAC CGATCCCTAA GCACGCGTCG ATTGAAAGTA TGCCACCTCC CTTGGCGGGT 
TTGTCGCCCG CCGCGTTCTA CCTCCGGGCC TACGCCTTGT ACATGGCCGG CGAACGACGC 
AAAGAAGAAG AATACCTCGA GCTCAAAAAG TAAGTGTTCT TTTGTGCTAC GGTCGGTCGT 
ACTTGCGTTT GTATGACCCT GTCCGAAACC TGTACCCTCG CTGATTCTTT ATTTCCTCTC 
CCTACTCTAG TGAAGCACAA AAACACGTTC CGGCGCGGAA TCCCTACCTG CAGCAGCTTT 
CGTTCGAGCT GCTGGACGCC TACGAGGATG ATCGATTGGA TGCGTTTGGC TTGTACGTGT 
ACGGCATGAT ACTCGTGGCT TGCGAAACGC ATAACACCGT CCCGCCGCAT TCACCTCCCG 
CCTTTCAAGT TTTGGTACGG AGCGTATGCC AATTTCCTTG GAACTGGAGT GCCTGGTTGG 
ACTTGGCCAC TTGCGTCGTA CAGAATCGCT CGCTGGAACG CATTGTGGAA GACGGTTTGG 
AGGATCTGCA CGGACATTGC GTGTATCATT TGTTTTGCGC CCACATTCAC GTCGAACATC 
AAGACCATGA GGAAGCCTTG GTCCTGTACG AACGGTGGAT GGAGCCCAAG TTGCTGCCCG 
CGTCCCCCTA CGTGCTGACC CAGTACGCGA TTGCGCAGTA CCACTTGCGG CAATTCACCC 
CGTCCCAAAC CGTCTGGGAG AATCTGCATC AAACCATGCC GTACCGAATC GATTCCATGG 
ACGTGTATTC CAATATTCTC TACGTTCAGG AAGATGCGGT GGGTTTGAGT CAGTTGGCCC 
ATACAACCGT GCAAGTAGAC AAGTATCGCG CAGAAACGTG CTGCATTGTT GGCAACTATT 
ATTCACTGAA ACAGCAACGA GCCAAGGCCA TTCAGTACTT TCAACGAGCG CTTAAAATTG 
ATCGGACCTT TACCAGTGCC TGGACACTGA TGGGGCACGA ATACGTGGAG TGGAAGCAGA 
CGGCCAACGC CATGGAAGCG TATCGACGGG CGGTCCAAGT CGCTCCCGAA GACTACCGTG 
CCTGGTACGG TCTCGGCCAA ACGTACGAAA TTCTCAATAT GCATTTGTAC GCCCTGTACT 
ACTATAAGAA AGCCGCCCAC CTGCGACCCT ACGATGCGCG GATGTGGTGC GCGGTCGGCA 
CGACCCTGGT GCAGTTGAAT ATGGTCGCCG ACGCCATTCG GGCGTACGAA AAGGCCTTGT 
CACACGACGA CAAGGAAGGG GTAGCGACAC AAAAGTTGGC GGCCCTGTAT CAACAAGAAG 
GGCAGCAAGA AAACGCGGCT CAATGCTATA TGCGACATCT GGAACTGCGA CATCAGGTAA 
CCTATCCCAA TGCGGGCGCT TTGGGCAGCA GTAGTCTCAC CCTGGAGACG ATGCTGCAGG 
GACTCGTGTT GGAAAGTCCG GAAGCCGAGG CTGTGCTGTT CCTGGCCAAC TACCACAAGT 
CGCACGGGGA GCTGGATACG GCTGGGACCT TGGCTTCGCG TTTGTTGGAA TATTCGGGGC 
CGGAAAAAGA ACAAGCCAAA GCATTGTTGC GAGAACTGCG GTCCCGCAAG GCCACGGTGG 
AACGTCGCGG CATGCAAACC CGATCGCAAG ACACGGCCCC AGACGACTCG TTTGCCTTTT 
CTCCCTAA 

 

Protein sequence

MKTTAIAPTS PFLSPHSPRV EQALEWNVPQ VRVDLQQACR VLSDRGLKLA AKWAAEQWMG 
LPPFTKAKTL GESTVNNVRE PVLAPSVVVE ELGDVEATNP HVYYAKSLMD LGEYAHAAAV 
LSAPIPKHAS IESMPPPLAG LSPAAFYLRA YALYMAGERR KEEEYLELKN EAQKHVPARN 
PYLQQLSFEL LDAYEDDRLD AFGLYVYGMI LVACETHNTV PPHSPPAFQV LVRSVCQFPW 
NWSAWLDLAT CVVQNRSLER IVEDGLEDLH GHCVYHLFCA HIHVEHQDHE EALVLYERWM 
EPKLLPASPY VLTQYAIAQY HLRQFTPSQT VWENLHQTMP YRIDSMDVYS NILYVQEDAV 
GLSQLAHTTV QVDKYRAETC CIVGNYYSLK QQRAKAIQYF QRALKIDRTF TSAWTLMGHE 
YVEWKQTANA MEAYRRAVQV APEDYRAWYG LGQTYEILNM HLYALYYYKK AAHLRPYDAR 
MWCAVGTTLV QLNMVADAIR AYEKALSHDD KEGVATQKLA ALYQQEGQQE NAAQCYMRHL 
ELRHQVTYPN AGALGSSSLT LETMLQGLVL ESPEAEAVLF LANYHKSHGE LDTAGTLASR 
LLEYSGPEKE QAKALLRELR SRKATVERRG MQTRSQDTAP DDSFAFSP