| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_38821 |
|---|
| Symbol | |
|---|
| ID | 7203581 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011685 |
|---|
| Strand | - |
|---|
| Start bp | 284203 |
|---|
| End bp | 285720 |
|---|
| Gene Length | 1518 bp |
|---|
| Protein Length | 469 aa |
|---|
| Translation table | |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002182936 |
|---|
| Protein GI | 219125330 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGACTC CCTGTGGACA CCAATGGAAA AGAACACTAT TGTGTCCGAG ACTGCTTGCG
ATGCGTTTAC TTCTCGTGAT CGGACTGCTG CAAGAAGCAG CCTCCTTTTC CACTGCTGGC
TGTAGCAATC CGGCAAGTTA CAGAGCAAGA CCAGCACTTG GGCTTGTACC GTTGCTGCTG
CCAACGACAG TACGGCTCAA CACCAAGGCT CGACCCGTTC TCGCTAAAAC TTTCCCGACC
ATGCCTTGGT CAACACTCGC CGCCGGTTCG TCTGATGGCA TCGCTCTGAG CGATACTCGC
CCTGAGAAAC TGTGGCGGTT CTTCTGGCGC AGCTTATGGA AGGGTATGAC CTTGCCATTT
CCGGCCCTAC GTAGCATGGT ACTCGACGTA TCCCAGCCCC AGAACGCTTC GGTGGGTTTC
CGGATCCGCG AAAGCCTAGC GGCCATCGTG GCGTATCTCG GCATCGGTGT ACTCGCCTAC
TATTGCGTCC TGGAACCGAC CTGGACCGTC GTAGACGCCT TGTACTTTAC CGTCACGTGC
TTCACCACGG TCGGGTACGG GGATCTATGC CCTTCCACGC CGCAGTCACA GACCTTTACT
GCGCTCTTTG GGATCTTGGG TGTCGCCTTT TTGGGAGCAG CCCTCGCTAC ACTTTCGTCC
AAGCTCGTAC AGACCCAAGT CGAAGTACTC CAGGCTGTCC GAGAAACTTC CAAACAACGC
ATCAAGGCCC TGTTTGAACA GGTGTCGCCT CTACCGATGT CTGCAGCGAC AACATCGACA
GCGACAACGT CACATGTTTC CCAAAGCAAT TGGCAAAGCC CCGACTCTAC CCGTACCGCG
GATACCGTGC TACTCTGGCG TCGCGTAAAT GCTCTCGTGT GGACACTAGT TAGGCAAATA
CTTCCGCCCT TGCTGATAAT TGTTGGTGGA GCGTGGCTCG TCCACCACCT GGATGCTCCC
ACGATGATGA CTCGACCATG GCGTGATGTC GTGTACTATG CCGTTGTCAC TGGTACGTAT
AATTTGGGTC AAGAGGCAGT GCATTAATTT GCCGTGAGTT TTTGTTTTAC TGTCACACAC
AAAACCCGAC GCTAAAGCAA TTGCTTTGTC ACCATTCCAG CTTCCACAAT TGGCTTTGGG
GACATTTGCC CCGTTTCCCA ACGCGCAAAA CTGGCGGCGG TCGTGTATAT TCCGCTGGCT
GTCGCTGCCG CGGGAGAGCT ACTGTCTGGT GTGGCCACAC GCATACTGGA ACGCCGGCAA
AAACTCGTCT ACCGACAACA GCTCCTCGCC GATCTGACGA TTGACAATCT GAAAGCAATG
GATGCGAACG GGGACGAGAA AATATCGCGA CATGAGTACA TCCAATTTAT GCTGATTGAA
ATGGGTATCG CGGATCAGCA AGAGTTTAAC GAGCTGCATC AGCAATTTGA AAAGCTTGAT
GTGGACGGAT CGGGCTTCCT CGATAAGAGA GATCTGGTAA AGATGGCAAG ATCCCGTGGT
GCCAATGTCA AAGACTAA
|
|---|
| Protein sequence | MTTPCGHQWK RTLLCPRLLA MRLLLVIGLL QEAASFSTAG CSNPASYRAR PALGLVPLLL
PTTVRLNTKA RPVLAKTFPT MPWSTLAAGS SDGIALSDTR PEKLWRFFWR SLWKGMTLPF
PALRSMVLDV SQPQNASVGF RIRESLAAIV AYLGIGVLAY YCVLEPTWTV VDALYFTVTC
FTTVGYGDLC PSTPQSQTFT ALFGILGVAF LGAALATLSS KLVQTQVEVL QAVRETSKQR
IKALFEQVSP LPMSAATTST ATTSHVSQSN WQSPDSTRTA DTVLLWRRVN ALVWTLVRQI
LPPLLIIVGG AWLVHHLDAP TMMTRPWRDV VYYAVVTAST IGFGDICPVS QRAKLAAVVY
IPLAVAAAGE LLSGVATRIL ERRQKLVYRQ QLLADLTIDN LKAMDANGDE KISRHEYIQF
MLIEMGIADQ QEFNELHQQF EKLDVDGSGF LDKRDLVKMA RSRGANVKD
|
|---|
| |