Gene PHATRDRAFT_3351 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_3351 
Symbol 
ID7203703 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011685 
Strand
Start bp615795 
End bp616733 
Gene Length939 bp 
Protein Length281 aa 
Translation table 
GC content56% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182872 
Protein GI219125196 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ACTCCGAAAC TCCCCGCCGG GAGCTACAAA CCGAAACAAT CGCTCGGTCA AAATTACCTC 
AAGGATCCCA ACACGGTTGC CAAAATTCTC CGCACTTTTC ACCAAGATGC AACCAAGCAC
CGACCCTCGG TCGAGCGGAT TTTGGAGCTA GGACCGGGCG CGGGTGCCTT GACCGATAGG
CTGGTGGAAA CGTACGGCGC CGCCAATATG CAAGCCATTG AACTCGACGA GCGCTCCGTG
CAGATCTTGC GGGAGAAGCA CCCCGGGTTG CGTGTGCAGC ACGCAGACGT CATGCAAGTG
AGTTACGCGG ACCTAGCCGA AGCTGAGGGA CAGCCGTTAG TGGTGATTGG CAACCTTCCT
TACTACATTA CCTCGCAGAT TCTGTTTGCC TTGGCCGACG CCAGCCATGC CGGGGCCGTC
CACAGTGCCA CCGTCACCAT GCAATGGGAA GTAGGTCAAC GAATGGTAGC CGCCCGATCT
ACCAAAGACT ACGGAATCCT GTCGGTTGTC TTCCAACTCT ACGCCGACGT TACGTGTCAC
TTCAAAATTC CACCGACCGT GTTTTACCCC AAGCCCAAGG TCGATTCCGC CTTGATTGGT
TTGCATTTTC TGGGTCCGGC TCGGCTACGT CAACGACTAG CTGGAGTTCG ACCAGCCGAC
TTGCGTCGGG TCGTGACGTC TACCTTTCAA CAGCGACGCA AAACGGTCCG CAACTCTCTC
AAGAAACTCT GCCGTGAAAT TGTCCCAGAC GGTGACGCCG AACAAGTACA GTTGCTCTTG
AACTCTCCGC CGCCGTTTCT ACCAGCGAGT GTTATGCAGG CGCGCGAAGA GGGGGACGAA
TTTTCTATCC AACAGGAGTT ACCGGAGGAT TGGGCGTCGA AGCGGCCCGA AGAACTTTCG
CCAGGACAGT TTATTGAAAT CACACGTCTG CTGTTTGGT
 
Protein sequence
TPKLPAGSYK PKQSLGQNYL KDPNTVAKIL RTFHQDATKH RPSVERILEL GPGAGALTDR 
LVETYGAANM QAIELDERSV QILREKHPGL RVQHADVMQV SYADLAEAEG QPLVVIGNLP
YYITSQILFA LADASHAGAV HSATVTMQWE VGQRMVAARS TKDYGILSVV FQLYADVTCH
FKIPPTVFYP KPKVDSALIG LHFLGPARLR QRLAGVRPAD LRRVVTSTFQ QRRKTVRNSL
KKLCQGDEFS IQQELPEDWA SKRPEELSPG QFIEITRLLF G