| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_29608 |
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| Symbol | PAF1 |
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| ID | 7203769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011685 |
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| Strand | - |
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| Start bp | 643380 |
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| End bp | 644606 |
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| Gene Length | 1227 bp |
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| Protein Length | 402 aa |
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| Translation table | |
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| GC content | 57% |
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| IMG OID | |
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| Product | PolyAdenylation factor subunit 1 |
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| Protein accession | XP_002183001 |
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| Protein GI | 219125463 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.275441 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTTATTGTAG CCCCAGCCTG CATGTCGCAC TACTCCCCGA ATAATGCTCG TCCCAAAGTC
TCCAACGCTG GTGGAGGCGG CGGCGCTGGG GGCATGTCGG CGGACGATTT GGAGCAAGAA
GCCGCTGAAC GCAACTTGAT CCGACGCTGC GTCGACTACC ACGGCCCCGC CATTTTGGAT
TTGCAGAACC GTCTCTACCG TAAAGCCTGT CGGAGTCACC ACACTCGACA CTCGGCGCTG
TACTTGCAGC CACACTCGTC GTATATGCGA CTTATGGGTA TGCCGCTGGC CTCCGTGGCG
GCGCCCATTC CCTCCGAGTG CTACCTCACG TACATGGCTC ACGTGACGAG GGCCAAAAAC
TCGACGCCAG TCATGTGCCT CAGTTGGACT CCGGGAGGTC GAAGGCTATT GACAGGAAAT
CAAGAAGGGG AGTTCACTCT CTGGGACGGC ATCACCTTCA GCTTTGAACT TATCATGAGC
GCACACGACG CTTCCTTCCG AAGCATGGCC TGGTCACACA ACCGGAACTA CCTGCTCACC
TCGGACGCCA GCGGCAACAT CAAATACTGG AGTCCTAGCA TCGCTCCCGT ACAGTCCATC
GACAGTCACA ACAAGCAACC CATTCACGGC CTTTCCATTT CTCCCTCGGA CACGAAATTT
GTGAGCTGTG GTGACGACGC CGCCGTGCGC GTATGGGACT GGGCCTCACA CAGCGAAGAG
CGGACTCTGG AGGGGCATGG ATGGGACGTC AAAACGGTTG CTTGGCATCC ACGGTCCTCG
GTCATTGCCT CTGGATCCAA GGACAATCTC GTCAAATTGT GGGACCCTCG GGCGGGTAGC
TGCCTGAGTA CGCTCTACGG ACACAAAAAT ACCGTCACCA AAGTGGCCTG GAACGACAAC
GGCAACTGGC TGTTGACGGC ATCACGCGAT CAATTAATCA AACTATACGA CATTCGCGCC
ATGAAGGAAT TGGTCTCGCT CAAAGGACAC CACAAGGAAG TTACCAGTCT CGCTTGGCAC
CCGTTGCAGG AAACGGTGTT TGCGTCTGGC GGAATGGACG GTACGCTGAT TTATTGGAAC
GTGGGTGCCA AGGGATCGGA GGAACCCGCC GCCAAAATCC CGTACGCCCA CGACATGGCT
ATTTGGGATC TGCAGTGGCA TCCAGCCGGC CACATGCTGG CAACGGGTAG CAACGACCGG
CAAACCAAGT TCTGGGCCCG CAACCGG
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| Protein sequence | MSHYSPNNAR PKVSNAGGGG GAGGMSADDL EQEAAERNLI RRCVDYHGPA ILDLQNRLYR
KACRSHHTRH SALYLQPHSS YMRLMGMPLA SVAAPIPSEC YLTYMAHVTR AKNSTPVMCL
SWTPGGRRLL TGNQEGEFTL WDGITFSFEL IMSAHDASFR SMAWSHNRNY LLTSDASGNI
KYWSPSIAPV QSIDSHNKQP IHGLSISPSD TKFVSCGDDA AVRVWDWASH SEERTLEGHG
WDVKTVAWHP RSSVIASGSK DNLVKLWDPR AGSCLSTLYG HKNTVTKVAW NDNGNWLLTA
SRDQLIKLYD IRAMKELVSL KGHHKEVTSL AWHPLQETVF ASGGMDGTLI YWNVGAKGSE
EPAAKIPYAH DMAIWDLQWH PAGHMLATGS NDRQTKFWAR NR
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