Gene PHATRDRAFT_48253 details

Gene Information

• Locus tag: PHATRDRAFT_48253
• ID: 7203388
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011684
• Strand: -
• Start bp: 646016
• End bp: 651252
• Gene Length: 5237 bp
• Protein Length: 1461 aa
• GC content: 50%
• Product: predicted protein
• Protein accession: XP_002182729
• Protein GI: 219124895

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.0799297
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGATGG AAACTCCCGC TTGTCTCGCC ATGATCCCGA CCTATCTCGC TCTAAACCCC 
TGTGACACGG CTCGCATTAC GGCATGGGAT GAATACCAGA ATGGCAACGC AGCAGCGAGA 
GAATTGGGAC TGCAAAAGCT CGATTACTAC GCGTATTCCG TTTGTGAACA GAGTACGTAT 
TCATGTGTGT GTGTGTGTGT GTGTGTGTGT TTAGTCACTG ACGTACCAAA TCACAAAACT 
CCTCCGAATG ATCTCACACG TACCAATATT CCTATATCTC TCCACATCGT ACCAACCAAT 
ATCTACTAAC TGTTAGGTTG CGATTGTATT CCGCAAGTGA ACGCTGTCCC TGACCAACGC 
ATTGTGCACA CGGGACGGGG AAACTGTCCA GCACACACCT TCTACGACAT TTGCAGAGTA 
CTCCCCAAAG TCAAGCTCAT CATTGGAGAA GGCACCACGA ACGATGATGT GACCTCGTAT 
CCCGAAGCCT GCGTCGGAGT GGGCAATTGG TTCCGTAGTC CGGCTTCCAA CAATTGGGGC 
CAAAACCCTA ACACGCCTTT GGAGCCAGCC ATTACATACT TCTTGGATCG CCTGGTGGAA 
TCGACGGAAC TCACCAAACC AGCTTCGACG CTTTGGGATG AGTGCTTTCA TCTGGAAACC 
AGTCAACGTC GCATTACCCA AGCCGAACCG GATTGGAATA CAATCGCCAC CAATGGAAAT 
CCCATTTCCC GGCACGAAGC CTGCTTTGTT TCCGTTGGTC AAAAAGGATA TCTACTGGGA 
GGGCGAAGTG CCGTGGGCGT GAGCGTATAC GACTTTCGGA CCAGATCGTG GTCGAATTTA 
CCCCGGACGT TGGACGTTGT GTTGCATCAT GCACAGTGTG TTGTATTGGA CGGAAAAATA 
TGGATGGTGG GGGCCTGGAC GGGGAGATTT CCGAGGGAAC CCAACGCGGA TAAGTTCTAC 
GTCTACGACC CCGCAACCAA CTCGTGGGAT GACACTCGTG CAATCATGTC GGACCAACGT 
AATCGGGGTA GTGCCGCTGT TGCCCTGTAC AATGGCGAGA TTTACGTGTC GCACGGAAAC 
CGAGGTACGC GTGTACAAAG AAGATTGGCG ACCGAATGAT GCTGCGTGTG GCCACGTACA 
CGTTGCGCGA GGACAGTCAC TTCGTGACTG ACGACCATAC GCTAATGTCT TCTCACCTTC 
AAAACACACT ATTTTCTCCT TTATGCAGGT GGTCACAACA CCAAAGCTCT CGTACTCGGT 
TTATTTGACG TGTACAATCC GGCGACCAAC ACGTGGAGGG CACTACCGGA CGCGCCTAAC 
CCACGCGATC ACACCGGCGG TGGTATCTTG ACGGACTCCT CCGGTGATAC ACTCTTTTGC 
GTGTCTGGTG GACGAGATTC TAGCCATCCT GTTTTCTTTA ACGAGTTCGT CCTACCGACC 
GACTGCTACA ATTTTCAATC GGAAGAATGG GAGGTACGCG CAAACATTCC GACACCCCGT 
GCAGGTTCAG CGTACGGCAT TACATGTGAC GGGCGGCTCA TGGTAGCAGG TGGGGAAGGG 
AATGATGTCG CGTGGGATAC AGTGGAGGTC TTCAACGGAG AAGTATGGGA AACATTTCCC 
AGTCTGAAAA CAGCAAGGCA CGGTACTGGG CTCGCTATGG ACTGTGGATG TTCCCAAATT 
CACATAGCCA GTGGCTCAGG TAAACAAGGT GCTTTCGATT TGGCCTCGAC GGAAACGTTT 
TTTCTCCAAG GTGTTGACGA ATCATGCAGT TCCTCACCAA TTCCGGTACC TACCAATTCC 
CCTCCACCTC CGACGCCGGC AGTACCAACG ATGCCGCCGA CAATATCGCA GGTTGTCAAC 
AACGAAACGA GTACAGTGCC CTCACCTATA GCGATAGCTC CAACCGCTGC CCCTCTTACT 
CAACCCACCA GTAACCCCGT CGAAGTATCG GATTTTTCAC TTTTTATCAA TGCGGGTCAG 
AACAATCAGG ACGTTACTGA CGGCAGCGGA AGTACCTGGG TTTCGGATCG TTACGCCAAC 
CGAGGAAACC TTTTTAAAAC GAAACTCAAC AATCCGATCC TCAGCATGCC CAACCCTGGC 
ATGGAAGAAG TGTACCGGAG CTCGCGCTGG TTTAGTGGTA CAGATTTTAC TTACACTATT 
CCGAGTCTCG AACCAGCTCT GTACCAAGTA CGTCTCCACT TTGCGGAAGT CTACCAGCCT 
GCACAATCCG TTGGATCCCG TCGATTCAAC GTCGAGATTC AAGGCAGTCC CGTGCTGACG 
GACTTTGATA TTTTTCTAGA GGCTGGTAGT TTTACAGCTC TGGTGCGAGA ATTTACTGTT 
TTGGTAGATT CGGGTCAGCT TGCAATCACC TTTGTCAAGG GACTTGCTGA GAACCCCATG 
ATTACAGCAA TTGAAATACG AGTAGCTCCG ACAACGCCAA ATCCAACAGA TGTTCCGTCC 
TGGTTTCCAA GCAATGCACC GAGTGAGACT CCCAGTATCT CATTCGAGCC AACGTCCCTG 
TCTAGCGCTC CAACCAGCGT CCCCTCGCTC GCTCCTAGTA TTCGGGGCGC ACCAATTTCG 
GTGTCGTCGA GTGCGTCACC GGTTGTGCCA TCGCAATTCC CCATTGAGTC CGGACCTGAG 
CCCTACCAAC TGTTTATAAA CGTTGGTGGA ACGGTTGACA CACTGGATGG ACTAGGAAGA 
CAATGGGTTC GAGACCAGTA CGGCACTCCA GCGCAATCTT TCACTATGCC AAATAGCGCG 
ATTTCAAATA TGGCAGCCTC GGGAATGGAG ACAATCTATA GACAACAGAA ATGGTTAAGT 
GGTGCGTTCA CATACACGAT CCCCGATCTA ATCAGCGGCT CATACTTAGT CAAGCTTCAC 
TTTGTGGAGG GCTTTTCTGG GGCTTTCAAA GTTGGTGCCC GCAAGTTCAA CGTCATTTTA 
CAAGGTACAA CAGTTTTGGC TGATTTTGAC GTCTTCAAAG AAGCAGGTGG AAGCTATGCT 
GCAGTGAGTC GACAGTTTGT TGCTGTCGTC AATGCCGGCA CAATTGCAAT CACTTTCGCC 
AAGGGGGGCA GCAATAACCC CACCGTCTCT GCAATTGAGA TTCAGTCACT ATCCACGACG 
CAGGCCCCCA TGGGCCTACC GACATCTATC CCATCTGGAG CGCCAACGCG TATTGATTCC 
GCTGTACCTA CAGCTGATAA CTCGAATAGG CCGAGCCAGC AACCTTCGAA ATCTACGTCC 
GTGTCGCCAT CGGTCAATCC ATCGATCTCA TCTGGGCCAA GTACCAACAG CGTCTCTCCT 
TCAGCTGTCG GATCAATATT GACACCGAAT ACTGTGTCCG CGGCACCAAC TACGACACCG 
AGCATCCCAA GGTTTCCTTC ACTGCAACCA AGCAATATCC CGATTTCTTC ACCCGAGTTT 
CAGATGCGAG TAAGTGTTGG CAGCAATATT GATGTTGTTG ACGGAAATGG AAATACATGG 
TTAGCGGACT CCCCCTATTG TACCGGCAAG GTGTATCGTG TTGGCGATGA AATTGCTGGC 
ACGCAACTCG GTCAACAAGA AGTTTACCGA AGCCAACGCT GGGAAAATGG TGCCATGTCC 
TGCGTCGTGC CGAATCTGAG CGCCGGAGCC TATGAAGTAC GACTACATTT CTCTGAGAAC 
TATGGCCCAA ACATGAACGC AGGCCGCCGT TTGTTTGATG TCTCGCTACA GGGACGGCTC 
GTACTGGGCA ATTTTGATAT TTTTACTGAG GCCGGGCTTG GGCTAACCGC TGTCATTCGT 
CAGTTTGACG TATCGGTTGA TCAAACTGGG ACTTTGACGG CCATATTTAG CAAAGGCATG 
ATTGAGAATC CGACGGTGTC TGCGATTGAA ATCCTTTCAA TTCGTGAGCC GGCCATCCAG 
ATGCCAAGTC TTTCGCCAAT TACCGCCGAT TCTTTCCCAA GCCAGGCTCC TTCTGAAGAA 
TTTTCTGCTT TGCCCTCTTC CCGTCCTTCT CTTTCCCCAA GTGCGGCTAT GAGTTTGTCC 
CCGACTGGAA GACCGTCGAA TGTCCCGGGT AACGGGGATT CTTCGATTGT TGATTCATCA 
GAGATTCCCA GTGAATCCCC CCCTACGAGT GCATCGGCAT CTACGACCTC TCCCTTGTCA 
AACAGCTCCA GCGCTTTACC ATCTGAAACA GAATCTCATT TTCCAAGCGT TGCACCTTCC 
AAAAGCCGTG GCGCATCTCC AGCAGTGAGC GAATCTTACA TTCCAAGTGT GGTACCTTCC 
GAAAACCCCA GCGTATCTCC AATAGTGAGG GAATCTTACA TTCCAAGTGT TGGACCTTCC 
GAGAGCCCTA ACGGATCGCC ATTTCGAATG GAATCTCACT TTCCAAGTGT GGTACCGTCC 
GAAGCCCCAA GCGTATCTCC AGCAGTGAGT GAATCTTTTA TTCCAAGTGT TGGACCTTCC 
AATAGTCCTA GCGGATCGCC GTCCGGAATG GAATCTCCGG TTCCAAGTGT TGGACCTTCC 
GATATTCCTA GCGGATCGCC ATCCGTAATG GACTCTCAGG TTCCAAGTGT TGCGCCTTCA 
AAAAACCCCA GTGTATCTCC ATCAGTGAGC GAATCTCACT TTCCAAGTGT CGCACCTTCC 
GATATTCCTA GCGGATCGCC GTCCGGAGCG GATTCTCTTT TACCGAGTGT TATGCCTTCC 
AGCAGCCCCA GCGAATCTCC ATCAGTGAGC ACAATTCCAA GTGTCGGACC TTCCGACAGC 
CCTACCGAAT CTTGATCAAA TGTAAAAGAA TAGACTTGAA GAGAAGTTTA AAAAAGTCGC 
CGGTTGGCTT TTGACCATCC AGTGTCATTG CGTATTGACA GTCGATTCAT CGAAGGGCAC 
CGTTTGGAAC AGATGACACT ATTTGTATCT TAAAGACTAC ATAAAAGCTG ACAGTCAATA 
GTTTGAGGAA TACCGACCCG TTGTTCTTCC CATTGTCTAC AAAATGATAT CTTCTTCAGT 
TCATTCGTAT TTGTCCCCAC TGTGACACTT TCTCTTCAGA TACAGTTGAC ATTATGTAAA 
GCCTGCAGAA CAGATTTGGT CGACTGGTCG ACTTTTTAGC ACAACTTGCC GTCATCTCTA 
TCAAACGTGT TTTCTGATTG AAAAGAATCA GCTGGCGTGC AGGGCGTGCG TAAACAGCGC 
AATTGCCATT TTCACCTCTT CCGGCCAACA AACTAGCGCA CTATTTGATA TGCCTATCTA 
CCACGCCTTT TTCGCTG 

 

Protein sequence

MAMETPACLA MIPTYLALNP CDTARITAWD EYQNGNAAAR ELGLQKLDYY AYSVCEQSCD 
CIPQVNAVPD QRIVHTGRGN CPAHTFYDIC RVLPKVKLII GEGTTNDDVT SYPEACVGVG 
NWFRSPASNN WGQNPNTPLE PAITYFLDRL VESTELTKPA STLWDECFHL ETSQRRITQA 
EPDWNTIATN GNPISRHEAC FVSVGQKGYL LGGRSAVGVS VYDFRTRSWS NLPRTLDVVL 
HHAQCVVLDG KIWMVGAWTG RFPREPNADK FYVYDPATNS WDDTRAIMSD QRNRGSAAVA 
LYNGEIYVSH GNRGGHNTKA LVLGLFDVYN PATNTWRALP DAPNPRDHTG GGILTDSSGD 
TLFCVSGGRD SSHPVFFNEF VLPTDCYNFQ SEEWEVRANI PTPRAGSAYG ITCDGRLMVA 
GGEGNDVAWD TVEVFNGEVW ETFPSLKTAR HGTGLAMDCG CSQIHIASGS GKQGAFDLAS 
TETFFLQGVD ESCSSSPIPV PTNSPPPPTP AVPTMPPTIS QVVNNETSTV PSPIAIAPTA 
APLTQPTSNP VEVSDFSLFI NAGQNNQDVT DGSGSTWVSD RYANRGNLFK TKLNNPILSM 
PNPGMEEVYR SSRWFSGTDF TYTIPSLEPA LYQVRLHFAE VYQPAQSVGS RRFNVEIQGS 
PVLTDFDIFL EAGSFTALVR EFTVLVDSGQ LAITFVKGLA ENPMITAIEI RVAPTTPNPT 
DVPSWFPSNA PSETPSISFE PTSLSSAPTS VPSLAPSIRG APISVSSSAS PVVPSQFPIE 
SGPEPYQLFI NVGGTVDTLD GLGRQWVRDQ YGTPAQSFTM PNSAISNMAA SGMETIYRQQ 
KWLSGAFTYT IPDLISGSYL VKLHFVEGFS GAFKVGARKF NVILQGTTVL ADFDVFKEAG 
GSYAAVSRQF VAVVNAGTIA ITFAKGGSNN PTVSAIEIQS LSTTQAPMGL PTSIPSGAPT 
RIDSAAEPAT FEIYVRVAIG QSIDLIWAKY QQRLSFSCRI NIDTEYCVRG TNYDTEHPKV 
SFTATKQYPD FFTRVSDATD SPYCTGKVYR VGDEIAGTQL GQQEVYRSQR WENGAMSCVV 
PNLSAGAYEV RLHFSENYGP NMNAGRRLFD VSLQGRLVLG NFDIFTEAGL GLTAVIRQFD 
VSVDQTGTLT AIFSKGMIEN PTVSAIEILS IREPAIQMPS LSPITADSFP SQAPSEEFSA 
LPSSRPSLSP SAAMSLSPTG RPSNVPGNGD SSIVDSSEIP SESPPTSASA STTSPLSNSS 
SALPSETESH FPSVAPSKSR GASPAVSESY IPSVVPSENP SVSPIVRESY IPSVGPSESP 
NGSPFRMESH FPSVVPSEAP SVSPAVSESF IPSVGPSNSP SGSPSGMESP VPSVGPSDIP 
SGSPSVMDSQ VPSVAPSKNP SVSPSVSESH FPSVAPSDIP SGSPSGADSL LPSVMPSSSP 
SESPSVSTIP SVGPSDSPTE S