Gene PHATRDRAFT_48250 details

Gene Information

• Locus tag: PHATRDRAFT_48250
• ID: 7203358
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011684
• Strand: +
• Start bp: 639940
• End bp: 640715
• Gene Length: 776 bp
• Protein Length: 195 aa
• GC content: 57%
• Product: predicted protein
• Protein accession: XP_002182576
• Protein GI: 219124576

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GGTTTGTTTC CTCGGCACTA ACCATCGGAA AATCGCGTAT TCGCTCGCCT CACCATGTTC 
CTACGCCACG CATTGTCCGC ACTCCTGTTG GCGGCGTTCA TTCCCGCAGC GCTGTCCTAC 
CAGACCCCCA CGCCACCGTC GTTGTCGCGT CGGGCGTTCG GCGCCGCGGC CTCGGCCGCA 
CTCGTGGGTT TCGGCACGTC TACCGCCGCG AACGCCATTG AAGCCTGTCC CAAAGGATCC 
AAAAACTGTA TCCGCACGAC TTGGACGCCT CCGGCAGGCG TCACGCCGTC GCAAGCCGAT 
GTCGCCCAGA CGATCCGGGC CGTCCTCTTG GAGTATCCAC AAGCCGGACA GCAAGACGTC 
GATAAGGGCG GATGGGAACT CGTACAGGAC GATTTGACCA AAGCCGGGAC CGCACGAATC 
GAGTACAAGT CGGGTATCGG CAAATTTGCC AAATTCTTCA ACGGCGGGAA ACCCTTTGTG 
GATGACCTTA CTCTGCAGAT TGTGGACAAC GGCGCCAACG TTCAAGTCCG CAGCGCCTCG 
CGTGTGGGAG ATTCCGACTT TGGCGTCAAC CAAAAGCGAC TCGAATACCT TGGTACCGCC 
TTGAAGGCGC AGGGATGGAC CGTACCCGAT CCCAAGTATT GAACTACTAT AAGCTAGTAG 
TGGTCGGCCG GCCATGCAAC AAACACGTAC TAGCAATCCT ACGTTACCAA CAGGTCTACT 
ACCTACATGC ATACCTACAC ACAGCCTTTT ATTACTACTA ACAAAGCAAC AACAAC 

 

Protein sequence

MFLRHALSAL LLAAFIPAAL SYQTPTPPSL SRRAFGAAAS AALVGFGTST AANAIEACPK 
GSKNCIRTTW TPPAGVTPSQ ADVAQTIRAV LLEYPQAGQQ DVDKGGWELV QDDLTKAGTA 
RIEYKSGIGK FAKFFNGGKP FVDDLTLQIV DNGANVQVRS ASRVGDSDFG VNQKRLEYLG 
TALKAQGWTV PDPKY