Gene PHATRDRAFT_48241 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_48241 
Symbol 
ID7203545 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011684 
Strand
Start bp612851 
End bp613799 
Gene Length949 bp 
Protein Length309 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182571 
Protein GI219124565 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.360676 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TGAAACCCTC GTGCATCCCA TGGCAGAAAG AAGCCTCACT ACCAATCTGG AATTGGCCAC 
TGCTCCAACT GACGATGTGA GCGTGGAAGA CGATTGGGGA CTTCCGTTGG ATTTGAATCT
CTTTGCTCAC CAGGAACGCC ACAGGATAGT GATCCACGAA GCGCAGGCTT CTCCGGTGTC
GATTTTCATT GAATGTGTAG AAGCGCTCAC GCCAGTCGAC ATGATGAGCT TGTCGTCCGG
GACCAACGAC GCCACCGGCT TTCGCGTCTG GACGGGTGCC GTTTTGCTCA TCGCCAGTTT
AGACACGCTC GTTGAAGACT TCAAAGGAAA GCGGGTACTT GAATTGGGTT GTGGGACGGG
AATCGGAGGG ATTGCCTTGA TGCTCTCTCA GCACGCCACG CCAGCCTTTC TTTGTTTCTC
GGACGCTGAT CAAAATGCAC TTAAGCTTTG CCGTCGCAAT TGTGAGCTGA ATGGGCTAGA
AGAAGTGGAC GAAAGATTGC TCCAGAACCT TTGTTCATTC ACGAAGAAGT CATTCTCAAT
TATGCAATTG ACTTGGGGAA CGACCATACC AAGTACAATC CCCGCTCGCT CTATGGATAC
AGTTGTGGCC ACAGACATTT TGTATGATAT TGAAATGCTG TCGAGCATTC TACAAACCAC
AATGGCTTGT CTCAAGCCAG GCGGTTCTTT TGTTCTCTCG CATATTCCTC GTGCATCTTG
CCCTGAGCAT CATCAACCTG ACGAAAACTT GGAAAGTTTC ATTGTTCAGC AGGCGGAGCT
TCATGGACTT GTCTTGCGAC GCCATATCCG ACCGAGAGAT GTTAGCAGCT TTGAGGATAG
CCAGGTCTTT TCGGACACCC TCGATACCAC GTCGTTAAGA GACATGGAAG CCATTGGGGC
TGCCATCTTG GTTTTTCATT TGGTCGTAGT CCAAAAAAAC CATGTTTAG
 
Protein sequence
MAERSLTTNL ELATAPTDDV SVEDDWGLPL DLNLFAHQER HRIVIHEAQA SPVSIFIECV 
EALTPVDMMS LSSGTNDATG FRVWTGAVLL IASLDTLVED FKGKRVLELG CGTGIGGIAL
MLSQHATPAF LCFSDADQNA LKLCRRNCEL NGLEEVDERL LQNLCSFTKK SFSIMQLTWG
TTIPSTIPAR SMDTVVATDI LYDIEMLSSI LQTTMACLKP GGSFVLSHIP RASCPEHHQP
DENLESFIVQ QAELHGLVLR RHIRPRDVSS FEDSQVFSDT LDTTSLRDME AIGAAILVFH
LVVVQKNHV