Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_48241 |
Symbol | |
ID | 7203545 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011684 |
Strand | + |
Start bp | 612851 |
End bp | 613799 |
Gene Length | 949 bp |
Protein Length | 309 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002182571 |
Protein GI | 219124565 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.360676 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TGAAACCCTC GTGCATCCCA TGGCAGAAAG AAGCCTCACT ACCAATCTGG AATTGGCCAC TGCTCCAACT GACGATGTGA GCGTGGAAGA CGATTGGGGA CTTCCGTTGG ATTTGAATCT CTTTGCTCAC CAGGAACGCC ACAGGATAGT GATCCACGAA GCGCAGGCTT CTCCGGTGTC GATTTTCATT GAATGTGTAG AAGCGCTCAC GCCAGTCGAC ATGATGAGCT TGTCGTCCGG GACCAACGAC GCCACCGGCT TTCGCGTCTG GACGGGTGCC GTTTTGCTCA TCGCCAGTTT AGACACGCTC GTTGAAGACT TCAAAGGAAA GCGGGTACTT GAATTGGGTT GTGGGACGGG AATCGGAGGG ATTGCCTTGA TGCTCTCTCA GCACGCCACG CCAGCCTTTC TTTGTTTCTC GGACGCTGAT CAAAATGCAC TTAAGCTTTG CCGTCGCAAT TGTGAGCTGA ATGGGCTAGA AGAAGTGGAC GAAAGATTGC TCCAGAACCT TTGTTCATTC ACGAAGAAGT CATTCTCAAT TATGCAATTG ACTTGGGGAA CGACCATACC AAGTACAATC CCCGCTCGCT CTATGGATAC AGTTGTGGCC ACAGACATTT TGTATGATAT TGAAATGCTG TCGAGCATTC TACAAACCAC AATGGCTTGT CTCAAGCCAG GCGGTTCTTT TGTTCTCTCG CATATTCCTC GTGCATCTTG CCCTGAGCAT CATCAACCTG ACGAAAACTT GGAAAGTTTC ATTGTTCAGC AGGCGGAGCT TCATGGACTT GTCTTGCGAC GCCATATCCG ACCGAGAGAT GTTAGCAGCT TTGAGGATAG CCAGGTCTTT TCGGACACCC TCGATACCAC GTCGTTAAGA GACATGGAAG CCATTGGGGC TGCCATCTTG GTTTTTCATT TGGTCGTAGT CCAAAAAAAC CATGTTTAG
|
Protein sequence | MAERSLTTNL ELATAPTDDV SVEDDWGLPL DLNLFAHQER HRIVIHEAQA SPVSIFIECV EALTPVDMMS LSSGTNDATG FRVWTGAVLL IASLDTLVED FKGKRVLELG CGTGIGGIAL MLSQHATPAF LCFSDADQNA LKLCRRNCEL NGLEEVDERL LQNLCSFTKK SFSIMQLTWG TTIPSTIPAR SMDTVVATDI LYDIEMLSSI LQTTMACLKP GGSFVLSHIP RASCPEHHQP DENLESFIVQ QAELHGLVLR RHIRPRDVSS FEDSQVFSDT LDTTSLRDME AIGAAILVFH LVVVQKNHV
|
| |