| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_48173 |
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| Symbol | |
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| ID | 7203311 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011684 |
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| Strand | + |
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| Start bp | 411657 |
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| End bp | 414404 |
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| Gene Length | 2748 bp |
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| Protein Length | 764 aa |
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| Translation table | |
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| GC content | 52% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002182530 |
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| Protein GI | 219124479 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.738632 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CGAAAACGCG TCATCATACT TTGCGGGAAA ACACACTTGC AATCACCGTC TTTGCAACTC
ACCAGGCTCT TCGCGGTTTC ACCAAAAGAC AGGTTGAAAT ATTGATCATT TCAGTCATCA
AAGCAATCCA CATCTAATGA GTGGAGGTGA CACGGCAGCT GTCGTTGCCG TATCGGCCAA
TCACCCTGCC GATCTCAGCT TATGGTTGGA TACTACTCAG CAAGTAGCGA ACGCTCTGGA
TTCCAAGGTA GACATCCTGA TCTTGCAATT TCATGTAATG TTTGTTTGTT GTACGCTTAA
TTCTCACCAT TCACTCTTCC CATCATCTGT TACCTGCCGG TAGCTGCAAG TTGAGAATTT
TTATCAGAAT GGAACACGTC CTGATGGTCG TCTGTTTCAT CAAACGCGGC AAACGAATAT
TCAACGAGGG ATTTTGAATA ACGCATGCGG ATCTTCGCTG ATTAAATTGG GAACAACGCA
GGTCCTGGCG GCAGTTACGT ATCAAGTTGG ACAACCAATT GTTTCCGGAT CGAGTGGTGG
CTCCGGGGAT GACTCCAACA AGACAAAAGG GGATATAGTG ATCGCCGCGG ACAACGGGAG
CGTCGATGCG GTCTTGCAAT CGTGGCTTCA ACGGCTCTTG CAGGACACCA TTGATCTTGA
GCAACTATCA ATCGTTCCTC AGGCGGCTTT TCGTTTGATC GTGACCGTAC AGGTTCTCAA
TGTGGCCGGC AATCTGAGGG ACGCTTGCTG GTTAGCATGT GTGGCGGCTT TATTAGATAC
GAAACTTCCG TCAAACACTG TCTATGAAGC TGGCAAAGTG TGGCTAAAGG ATAACGACGA
TACTGCTGAT GCCAATACTG GCACTAAATC ACTGGAACTT CCCGTCTTGC CGATTTCGTT
AACAATGGGA GTGTGGTCCA CCATTGAAGC GGGTATGGTG CACATGGTCG ACCCGACAAT
AGAAGAAGAA GAAAGTCTGT CAGGGAGCTT GACGATAATT GTCAATGCTC GACAGCCGGA
GGAAGTGTTG TCCGTGGATT TTTCGTCGCT GACGCCAATG ACAAGGACCG ACCTCGCTTT
GGCGATCAAA ATGGCAATAG GGCGAGGGAC AGAGGTCGGA GCTATCCTAT CCCCATAATT
GTCTACTGAA ATTGAAGAGT TTCTCTCAAT TTTTCACGCT TTATATACAT ATCCTAGTAT
AACCAAACGA ATCGATATCC GTTCACGACA GCACAAGCAA TAGGTTAGCT TGTCAGTTTA
CCTAGAAGGG AATAGACCGG ATATTGTCGT CTAGCTATGT GTTGTAGCGC CTATCTCATA
CACTCCCTAT TTCAGCGTAA GATCGATGTC TGGAATGATA GTCGCAAGAC ACTCCAGGCA
CTCTTAAAAA AGTTGAAGCG CACTTTGGGA GAGAATTCAG AGTCTGGAGA AAAGGACCGA
GACTTTGCAT TGTCATTCTC TTGCTGCAAA AAAACGACGG CAAGAACGAG ACAAACGGTT
CGTTCGGGAA GCTGCACGGA TACAATGGAG GCGAATCCCA TCATTCTCGC CGCTGTGGAA
GGCGGGGGAA CATCGTTTCG CGTCGCGGTC TGTCGCGTAC CACACGAGCA TACCAAGGAC
AGTGGCACGG CATCGCCATG GCCGGAAATC CTGGCCCGCA CCGAGATCGA TTCCAGTCAC
GATCATCCCC TCGTCACGTT ACGAGCGTGT GTAGACTTTT TCGAAGCTTA CAAGCCCGTC
GGCGGTTACC ACGCGCTGGG TATCGCGTGT TTTGGACCGC TCGGTGTGAA CGTGGCCCGG
GTGGAGGACT ACGGCCGAAT ATTGGCAACG TCCCCCAAGG CTGCATGGCG TGGCGTAGAC
TTGCTGACCC CCCTGGCTAC GTGTTGTCGG GGCGATACGC ATGCGCTCGT GACACGTGTA
GATACCGACG TGAATGCGCC GGCCCTGGCC GAGTACTATC TCGCAACGCA ACGAGTGAAG
CACCCGGGTG CGGTAGCCTA TCCTGTCGAC GACGCCGTCA CGTCGGCATC ATCAGAAATA
TCCAGTATTG CTTACGTGAC GGTCGGAACC GGCGTCGGGG TTGGTTTGGT TGTGCACGGT
CAGCCAGTAC ACGGTCGGAT GCATCCGGAA GGAGGCCACG TTGCGGTACA ACCCTTAGCC
AACGACGTGT TTCCCGGTTA TTCCTGGGGT CAGAAGAACT GTCCGTACGA AGGAGTACAC
ACAGTAGAAG GTCTAGCCTC CTCCGTGGCC CTGACTGAGC GGCTGGCGCA ACTACAACAA
ATTCCAACGC CCTTGTCCCG GAGTGTCCTG GCCTCTCTAC CGGATGATCA CGAAGTATGG
GATCACGCGG TGAACGCGTT GGCGAATTTG TGTGTGACGC TGCTGTTGAC ATTGTCCATG
GAGAAGATTG TGATGGGCGG TGGAATCCTT CGACGAGCAT TGTTGTTGCC CCGCATTCAG
GCACGGACGG TGGAGTTGTT GAACGGCTAC TTGCCCTTAC CGGAGGACAT GTCGACACTG
ATTGCGACGA GTTCGTTCGG AGACGACATT GGCTTGATTG GTGCCATGGT GTTGGCGCAA
TCGAGTCTAC AACTCAACGA GCATACCCGC GAATCACGAA AGCGACACGA AACGGTGATG
AAGCAAACGG CATTCAAACA CGGACTTTGG CACGGAATGC TGGTGGGCGC TGTCGGTGCA
GCCTTGGTAT GCAAATACGT GTGGTACGGA CCGCGGACTC GAAAGTAA
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| Protein sequence | MSGGDTAAVV AVSANHPADL SLWLDTTQQV ANALDSKLQV ENFYQNGTRP DGRLFHQTRQ
TNIQRGILNN ACGSSLIKLG TTQVLAAVTY QVGQPIVSGS SGGSGDDSNK TKGDIVIAAD
NGSVDAVLQS WLQRLLQDTI DLEQLSIVPQ AAFRLIVTVQ VLNVAGNLRD ACWLACVAAL
LDTKLPSNTV YEAGKVWLKD NDDTADANTG TKSLELPVLP ISLTMGVWST IEAGMVHMVD
PTIEEEESLS GSLTIIVNAR QPEEVLSVDF SSLTPMTRTD LALAIKMAIG RGTERKIDVW
NDSRKTLQAL LKKLKRTLGE NSESGEKDRD FALSFSCCKK TTARTRQTVR SGSCTDTMEA
NPIILAAVEG GGTSFRVAVC RVPHEHTKDS GTASPWPEIL ARTEIDSSHD HPLVTLRACV
DFFEAYKPVG GYHALGIACF GPLGVNVARV EDYGRILATS PKAAWRGVDL LTPLATCCRG
DTHALVTRVD TDVNAPALAE YYLATQRVKH PGAVAYPVDD AVTSASSEIS SIAYVTVGTG
VGVGLVVHGQ PVHGRMHPEG GHVAVQPLAN DVFPGYSWGQ KNCPYEGVHT VEGLASSVAL
TERLAQLQQI PTPLSRSVLA SLPDDHEVWD HAVNALANLC VTLLLTLSME KIVMGGGILR
RALLLPRIQA RTVELLNGYL PLPEDMSTLI ATSSFGDDIG LIGAMVLAQS SLQLNEHTRE
SRKRHETVMK QTAFKHGLWH GMLVGAVGAA LVCKYVWYGP RTRK
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