Gene PHATRDRAFT_48146 details

Gene Information

• Locus tag: PHATRDRAFT_48146
• ID: 7203296
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011684
• Strand: +
• Start bp: 338938
• End bp: 343983
• Gene Length: 5046 bp
• Protein Length: 1348 aa
• GC content: 53%
• Product: predicted protein
• Protein accession: XP_002182515
• Protein GI: 219124448

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATCGTTGAGC GCTTGTCTTG TTGCAGCAGC TGTTGCTATT GCTGTTAAAG TCTCCTGTTA 
CAGTTTCTTC TCAACTGGCA ACATCGAGTG GACGTTCTCA TCATGTTCGA AGTGTCGTGG 
GGCGAGATGG GCGTGTGCAT CGGTTTGGGT CTCTTCTTAA TCGGCCGTGA GGATTTGCCC 
AAGGCGGCGC GTATGGCCGG TACGCAGGTG GGCCGAGTGG TGGGTTTGTT GCAGGGTGCG 
CGGGCCCGCG CCGATCAGTT CGCCGGCCAG AACGAACTCC ATCAGCTGCA GAATGAACTG 
CGGTCGGGAC TCCGGGATTT GGATGCGGTG AAATCGGAAT TGGCCGTCTC GTTGAGTTCG 
CGGGGAGTGG TAGGACGACA ACTGGGAGCC ACCGTGCCGG GGGTCAACCG GGCAACCGTG 
TCGCCGATGA CCACACATAC CATGTTGACG GGAGGGACTG CTGCGGGAAG TCTCGCGGCT 
TTAGGGACGA TGGGGCTGCC CGTAGGACGA CCAGCCGGTG GGGACGATGA CGGCACGAAC 
GTCGATGGGA CAACGAATGC CGCGGGCTCG GAAGGACTGT CCTGGACGTC GTCGCCCGGT 
AGTCCCATAC ATGCACCGCC CCGAACGTTG CCTCCCGTCT ACCAAACGGT GGCAGCCGTC 
GCCGAGTCGG AATGGGAATC CCAAGGGATT GCCTTTCGTT CCCGAGCCGA ACAAGGATCG 
GGTCTGGCCA ACGCGTCGGA TCAAGCGACG ACGGGGTCGG CCCTTTTGGC CAGTCTTTTG 
CGACAATCGC TCGTCTTTGA CCAATACGAT CGAGTGGTAG CGGATCAAGA CGAAGCTCTC 
CAATCCAAAA TTAGTCAAAT TAAACAAAAG GCTCGAGATC AGGTGTCCGC ATCCAGTGAC 
ACGGAGGTCC CCCGATGATT GGTAGATGGG AGGACCAAGC CCTATCCGGA ACGTCGTTGG 
AGGCCCAAGC CGTGTTGCTT TGTTTCTGAC CGCGGCGCTG TCGGCAATTT TCCGAGTTGA 
TCCACACCAG CTCCACGAAA CTCGTTCCGC TCCCGTAGTG TTGGCCACCC ATCGGGGACA 
GTATCTTCTG CTGCGTAAAA TTCATGTTTT TCAAAGCTAG CACGCACGGG TCGAAAAATC 
ATCTGTCTAT CCAACAATCG AGAGTGTACG AAAGGTCTGC AAAGCCATAT ACTACTCAAT 
TAGATTTGGG CTTGTGATCC AAAGTGCACG GTTTTCTATG TAATGTCCGT TAGAGCAGCC 
TAGGCAACAA GCCTCGATAA AGTTCGAATG CTGGTGTCAC CGAATAGGTA GTGACTGTGA 
AATAAACAAG GTATAGATAG CATAGTATCT CACTGTCAGA GTGTTTCGAG TCGACACGAT 
TTACTGTTCG TTGTAGGTAG CTAGCTCATC GTCTTGCCGA CTGTACGGGA TTCAATTGCT 
CACAACGGTA GGTATGCTTT TTTCGAGCAG TAGGGTAGGT TCAATACACT CTCTTTACAG 
TTAACAAAGA GTGGGAAGCG CCGTCTGTCG AGACATGGAC GACTCCCCAC CTCGAAACAC 
AGTCGCAAAG GGATCACGAT CAGATAGTGC GGGGGGTTGT AGGAAGTCTG GAAATGCTCC 
ACAACTGTAC CGACACTTGT AGTCATCCAC TTCCCCATCC ATTCCTAGCG GTGCCAAAAG 
GACCGTCGGC AAGTACGTAC TGCTTGTGGA ATCACTAGGG TTGAGTATAC TGTATCCAAA 
GAAAGTGTAG GCCCGAGTGA CACCGTACGA GGCCTAGTAG AGAGAGAGAG TGTGTGTGTG 
AGTCGGATTG TTCTATACGA ACAGTATGAG TACGGACACG AACGAGGACA ATAGCTTGCT 
CGCCGCGGAC GAAGCATCGA TTCTGGACGG AATGGACGGA CCGCCACAAC CTCCCCCCGG 
AGAGATCCGG GAAGATCCCT GGATCCTACA GCCTCCCACC ATGGCGGCCC TCGGACAGCC 
CCCTCTCGCT ACCCCGCCGA CGGCTCTGGG TGATCCGTCC GCGGCGGCTC TGTGGCGGGA 
ACGCGAACGC CGCCAGCGTA CCGTACGACT CCTCATGATG TTCCTGCTCA TGCTCTTACT 
CATGGACGGC GAAGACGGGA ACAATAACAA CGCACCGCAC AAACACGGCT TGCGATCGCG 
GCGGGACCCA CGGAGAAAAC GCGACGCCGG GAACCGTCCG CTCGATTCCG TTGTCTGGGA 
CGCACGCACG TTGCAAGAAT CGCGGTTACG GGAGATTGCC CGGACGCATC CGCGGTATCA 
GGCCTTGATT GATAAGAATA AGGGAGAAAA TGTAGAAGCT GGTGTTTGGG AATGGGCGCA 
GCAGTTGGCG GAACAAGAAC GGGACGAGTT TGGGGTCGAA GCGGCTCCGG CCAGTAAACC 
AATGTTGTCA CCAGCAGGTA CGATTGTGGA TGAAGAAGCC ACGCGAAAGG TGTGGACGTA 
TCCGTGGAAT GCGACGGGAT TTTATCGCGG TGAATGGTCC CGACGAATCG CTAAACAAGC 
AGACGAAACG ACCCCTGCGG TTTCCAGACC AAAAGTCCAA GATGCGAACG CGACTGTGGC 
CCAAGAACGA AGCCTTCTCG ATCCGGTGGC TCTGGAAGAG ACACTCTTGG AAACGCTTCA 
GAGTCGTGGG ATCCAGGCGG GCGTCGTTTT GTTACCAAAC GAATTGGCCG TGGCTACCCG 
GGATGACAAC AATCTAACGT CGATTCGTTG GGAGCAAATG ACCATGGATG CCAACGGGAA 
AATGTACAAA TCGGTCCAAG CCACTACCGA AGACCAACAT ACTAACAATG ATAAAGAGGG 
CAGCCCATCA ATCACCCTTA CTCACAACTC AGGTCGCGCC GCGTTCCAGA TATACGCTAG 
ATCGATTCCC GCGATGAAGG AACTGAGTTT GGTGGATGGG TTCGTCAAGC TCTATGATTC 
TACGAGTCCG GGATACTCAA CCCGCAAAGA TATTCTGTTG CGTGTACGGG GCGTGCTGAT 
ACACGCCATA GGGCAACTTT CCTTGGTGTC GAATGTGGAC GTGTCGAGGA GCGCCTTTGT 
GATTATGCCC TCCGAAGCGC GTGCAACGCA ACATCGGCGT TTACGGACGG CTTTGGAAGA 
TTTGGACGGT GCCAGTTTGC CCCAGATCCG TCAAGATGCG CTGGACTTGT ACGGTGGTCG 
TTTGTCTACG GAGGACCGTG ACTGGGCGTT GCTTTCTACC CCCTTTGGTG GTCGTCGTTT 
ATCAAGCGAA ACTTCCACCC CAAGGAATGC GAGAGCAGCG ATGGAGGAAG CCACGGAAGT 
GGACGCGGAG ACTTTACCAG TCTCCTCGAA TGCTACACAT CAACAATCCG AATCAACGTT 
GGAACCTATT CGGATTCCGT GGTCGGATGT TGTTGTTCCT TATCCCTTTG TTCGAGATGA 
CAAGGAGGAG ACGGTCCGTC GGGTTCGAAC ACCAGCAGCA CGTCGTATGC CTCCTCGCGA 
GCAACTGCTA GAATCCAATG CTGCCTCCTG TGAATTTGAA ATTACAATGA GTATTGAGCC 
GACAGAGTGG ACCGTGGGTG CGTGGCGAGC GCTTTTAAGC CGACACGCAA ACGAGGCCAA 
GCGATTGGAT CCTTCCAAAG CTGGGGATAT CACAGAGGAT TCACCAAGTG GGAAGGAAAA 
TGTCAGTACT CCACCCATGG GCCCCACCAA TCGTCGGAAA ATACTTCAAG ATCAGGCTTT 
GGTTATGAAT ATGGCCGGAT CAATCCACTC GCCAAACTGC GACTTTACAG CTACCTTGAA 
TGTCACGGCA ATTCGGACGG ACTGGGAAGC TACGACGGGC AAGGTCATCA ATTACAGTTT 
TTACATGATG CTGGTTTGCA TGGCGCAGAT TATATTACTA CTGCGTCAAC TATTACACTC 
GCAGGCTCAA TCCGCGGCGG TTCGTGTATC AATGCTCTGC ATTGGATGGC AAGCAGTCAT 
TGACGCACTC GTGTGTTTGG TACACATTTA CTTCAGCCTT GCCATGCAGC CGCTTTTTAC 
GGCCTTTGCC AGTGTGGCTT TTTTCAAACT ACTGATATTT TGTGTCATTG AGATGAAGTA 
CATGAGCAGT AAGTGGATCG ATGCTGATGT TAAAAAAAAA CTCTCGGCAT CTGAATATAG 
CCTCATGGAA TTCTTTTGCC GTGCGTAGTT ATCATTCAGG CGAGAAACAG CAGCAATGGT 
GGTCAGTCAA CAGAAGTTTT GAGAAGACAA GTGGCAATGT TACATCTTCG GTTTTATCTT 
GCATTGTTCG CGGCTTTTTT AATGTTGTTT TACATGGGCG AAAAGTACCG CACATTTTAT 
GTTCTTGGGT TGTACTCTTT CTGGGTTCCA CAGATCATTC TGAACATAAT CACCGAAGCG 
AAGAACCCGC TGCACAAGTA CTTCATCAAT GGTATGAGTC TATCGCGACT TGTGGCGCCG 
CTGTACGTGT TCGGTGTGCC GAACAACTTT TTGAAGGAAA TCCATGCCGA TGCTCCGACG 
GACGCATGGT TGTGCCAGCT ACTTGTGCTG TGGGTCGGGG TACAGGTGGC TATTTTACAC 
TCCCAATCGA AGTACGGAAC TCGATTTATG ATTCCAGCAC GATTTCTGCC ACCCAAGTTT 
GACTACAGCC GGCCAATTCC CTCATCCATG CTTCCACCCG GGGCCTTGGA ATCGCCGGTC 
CCTGAGTTGG CGCTGGAGCG GAATAGCGAA AACCAGCCGT TGGTGACATC CAGCCCGGAC 
ACCTCGTCAC CAGCGCGCGA TCGATTACGG CATACGACGG CCGTGACGAC AAGGAATCGA 
ATGCGACGAA CGAACCGAAC CGAAAGCAGC GGAATGACTA CCGAAACGCT CGATCATTCA 
CGATGCAATA GTCCGTTGGC GCCGACGCTA GACTGCAGTA TTTGCTACGA CGCAATCAAT 
GTACGAGATC AGCTTGGCTA CATGCTGGCT CCGTGCAATC ACTTGTTCCA TCGGGATTGC 
CTTATACAAT GGATGGATGT GAAAATGGAA TGTCCCATTT GCCGCACCGA ATTACCCGCA 
TTATAG 

 

Protein sequence

MFEVSWGEMG VCIGLGLFLI GREDLPKAAR MAGTQVGRVV GLLQGARARA DQFAGQNELH 
QLQNELRSGL RDLDAVKSEL AVSLSSRGVV GRQLGATVPG VNRATVSPMT THTMLTGGTA 
AGSLAALGTM GLPVGRPAGG DDDGTNVDGT TNAAGSEGLS WTSSPGSPIH APPRTLPPVY 
QTVAAVAESE WESQGIAFRS RAEQGSGLAN ASDQATTGSA LLASLLRQSL VFDQYDRVVA 
DQDEALQSKI SQIKQKARDQ VSASSDTEVA SSSSCRLYGI QLLTTSSTSP SIPSGAKRTV 
GNMSTDTNED NSLLAADEAS ILDGMDGPPQ PPPGEIREDP WILQPPTMAA LGQPPLATPP 
TALGDPSAAA LWRERERRQR TVRLLMMFLL MLLLMDGEDG NNNNAPHKHG LRSRRDPRRK 
RDAGNRPLDS VVWDARTLQE SRLREIARTH PRYQALIDKN KGENVEAGVW EWAQQLAEQE 
RDEFGVEAAP ASKPMLSPAG TIVDEEATRK VWTYPWNATG FYRGEWSRRI AKQADETTPA 
VSRPKVQDAN ATVAQERSLL DPVALEETLL ETLQSRGIQA GVVLLPNELA VATRDDNNLT 
SIRWEQMTMD ANGKMYKSVQ ATTEDQHTNN DKEGSPSITL THNSGRAAFQ IYARSIPAMK 
ELSLVDGFVK LYDSTSPGYS TRKDILLRVR GVLIHAIGQL SLVSNVDVSR SAFVIMPSEA 
RATQHRRLRT ALEDLDGASL PQIRQDALDL YGGRLSTEDR DWALLSTPFG GRRLSSETST 
PRNARAAMEE ATEVDAETLP VSSNATHQQS ESTLEPIRIP WSDVVVPYPF VRDDKEETVR 
RVRTPAARRM PPREQLLESN AASCEFEITM SIEPTEWTVG AWRALLSRHA NEAKRLDPSK 
AGDITEDSPS GKENVSTPPM GPTNRRKILQ DQALVMNMAG SIHSPNCDFT ATLNVTAIRT 
DWEATTGKVI NYSFYMMLVC MAQIILLLRQ LLHSQAQSAA VRVSMLCIGW QAVIDALVCL 
VHIYFSLAMQ PLFTAFASVA FFKLLIFCVI EMKYMSIIIQ ARNSSNGGQS TEVLRRQVAM 
LHLRFYLALF AAFLMLFYMG EKYRTFYVLG LYSFWVPQII LNIITEAKNP LHKYFINGMS 
LSRLVAPLYV FGVPNNFLKE IHADAPTDAW LCQLLVLWVG VQVAILHSQS KYGTRFMIPA 
RFLPPKFDYS RPIPSSMLPP GALESPVPEL ALERNSENQP LVTSSPDTSS PARDRLRHTT 
AVTTRNRMRR TNRTESSGMT TETLDHSRCN SPLAPTLDCS ICYDAINVRD QLGYMLAPCN 
HLFHRDCLIQ WMDVKMECPI CRTELPAL