| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_48071 |
|---|
| Symbol | |
|---|
| ID | 7203424 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011684 |
|---|
| Strand | + |
|---|
| Start bp | 106198 |
|---|
| End bp | 107237 |
|---|
| Gene Length | 1040 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | |
|---|
| GC content | 46% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002182476 |
|---|
| Protein GI | 219124367 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | AAGAACCATG CCGGAAGCCA CGATGAATAA AACCGACTAC AATGGCACGC AAACCACTTA
CAGAGTCGCC ATTGCTCTCA ACAACATAGG AGTCGACCTC CTTGAGAAAG GTTGCTTCTC
CCAAGCCTGT GATACACACA AAGATGCCGT TGGAGTGATA ATGGAGGCTC ACAAGGTCGC
AGAACATGTC CATCCCATGA TCATTGCTTT CCACCGCAAC GATTTGTCAA ACTTGGTCCT
GATCAAAGAC TGTCTTCATG CAGCTCTCAC TCGTGTTTGC ATCTCGCGCG ACCCTTCTCG
CGAGACTCAT CCCAACAGTC GGATTAATGC AATAAGTGAC AAGAATGTCG CGCAAACGCT
GGAGAAGATG GGTCAGGTCT TCAATCGGAG TGCAAGCCAA CCGAGTACGA CATTTACCTA
CTCGCCGGTC AAGATCGACT CAGGAAAAAG TATCTCTGAT GGCCTTTTAC AGTTCAGTCT
CGATTTTGAA ACAAGTGTTA TCCTTTTCAA TTTTGCGATT GCCCACCTTT GTCTGGCCGA
GACTGTCGAA GATTCAAAAT CCGCCGAAAC TCATATGCAG ATTGCTCTGC AGCTTCTTTG
CTATGCAAAC GATATAGCTG CTGTAAAGTG CTACGGAGGC GAACATCTTG AGGCACTGAA
TCTCACTGAT CCTTTCCATC TCTATCGCCT GCTGCTTTTG ATGGCTATGA TTCTGCAAAA
TACAGTACGT TTGTTTTGTG TTTTGGGGAT GGATGACCGT GCTGGCGAAG CAGCTCAGCG
CTTCTTCGAT TTGGAAAGTG TTGCATTACA GCATCGAGAG GTCTTAAGGC TTTATATAAC
ATCAGCTTCC GCGGCAGCTT GAGGTCAGGC TCTTTAAATT CCATGTACAA TAAACATTTT
GCACCCTCGG CACAATCAGC ATAGCAATCG CTGGTTGACA TAATGAACGC AGAGCATAGC
GGTGGTCTTT AAATAGGCTG CAGAATACAC GCATGCGTGA AAATTCTCAT TTGTTGAAAG
AATTTTGGGC TCCACTTACT
|
|---|
| Protein sequence | MPEATMNKTD YNGTQTTYRV AIALNNIGVD LLEKGCFSQA CDTHKDAVGV IMEAHKVAEH
VHPMIIAFHR NDLSNLVLIK DCLHAALTRV CISRDPSRET HPNSRINAIS DKNVAQTLEK
MGQVFNRSAS QPSTTFTYSP VKIDSGKSIS DGLLQFSLDF ETSVILFNFA IAHLCLAETV
EDSKSAETHM QIALQLLCYA NDIAAVKCYG GEHLEALNLT DPFHLYRLLL LMAMILQNTV
RLFCVLGMDD RAGEAAQRFF DLESVALQHR EVLRLYITSA SAAA
|
|---|
| |