Gene PHATRDRAFT_47899 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_47899 
Symbol 
ID7203165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011683 
Strand
Start bp386025 
End bp387020 
Gene Length996 bp 
Protein Length198 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182214 
Protein GI219123818 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATATGCAAGT GTCCTCGTTT GTGCAGTCCA CAAACCTAGA GACCCGAGTG GTAGTGCTTG 
GGTCTTGCGC TATCAAAAGG TGAGACAAAG GGATACTGTT GACAGTGAGC TGTCCTGCCC
TCCTTTTGAT CTCCGGAAGG CTTGGAAACA TTGGCTGTGA TCGCCGGTGG TCCGCGGGCT
GACACCTCCC TTGCTGATGG TTTGCAACAC TGCGGACTGG TTAGCTTTTA CAGTCATGAT
CGCAAATCCC TACGTCCAAT AGAAATCTCA TTTACCTTTC TACTTTGTTG TCCAACAGTA
TTACAGCTTT TTCGACAGCA ATATAAGTAT CGTTATCTTT TTGTTCAAAA CGCAATCGGC
GAATACACTC GCTGTGCTAT CTCGAATTGA CTCCAAAAAA TGGCGCCTGC AGCTATTCTT
CGGAGTCACG ATTTTGCCGA CTCTGATATT CCTCTCATCG ATATTGCCAG TGACGAGATT
GAGCGCATGA GAAACCCCAA AGACGATTGT CGTCGATATC ACTCCTTCCC CCCCGCGTGT
CTGGCGCTGT TGATGAGCAT TGAAGGTAAT CATCGGTGTG TAGACTGTGG GGAGCCCAAT
CCTCAGTGGG CCGCGGTTCG TTACGGTGGT CTTTTGTGTC TACAATGTAG TGGTGTACAC
CGCTCTCTGG GAGTGCAAGT ATCGAGCGTC CGTTCAATTA GTATGGATGA TTGGTCTTTG
GAAGAACTTC TTTCGATGTT GGAAGGTGGC AATCGTCAAC TCACTGGATT TTTTGAGCGA
CACGCGCTCT CTGTTGAAGG TTGCTCCGTA AACAGCAAAA CAATAACACC CGAAAATGTC
ACTCGCTTAC GCTACAAGAC CAAGGCAGCG CTCTTTTATC GGAAACAGAT GGAGCTACAT
GTACAAAAAA TCCTAGACTC GGGGCCCTAC AGAGGTCGAG AGAGTTCAAG GCGAAATCAT
TGTCATTTAG AACGACGAAA TACGACGCTA GAATGA
 
Protein sequence
MAPAAILRSH DFADSDIPLI DIASDEIERM RNPKDDCRRY HSFPPACLAL LMSIEGNHRC 
VDCGEPNPQW AAVRYGGLLC LQCSGVHRSL GVQVSSVRSI SMDDWSLEEL LSMLEGGNRQ
LTGFFERHAL SVEGCSVNSK TITPENVTRL RYKTKAALFY RKQMELHVQK ILDSGPYRGR
ESSRRNHCHL ERRNTTLE