Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_47843 |
Symbol | |
ID | 7203072 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011683 |
Strand | - |
Start bp | 218456 |
End bp | 219447 |
Gene Length | 992 bp |
Protein Length | 268 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002182348 |
Protein GI | 219124097 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.136219 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTTGTCCTTC ACGAATCGCA ATAACTGCAA CGGAACCATG TCTTCGAATT TGAATGAAGT TCAGAATGCT ACTGTCGGTA TGACGGTTGG CGTTATCGAG GTGAGTGTAA ACAAGAAGCA GTTCCGTTCA AAAGCTGCTC CGCGTCGGTT AAGTCGCTGA GAGTAGTATG GTGCAGGAAA CCAGCCGTAT GTTGTTCGAA GAGATGTGCA TTATTTGAGG ACTAACGGTT ATCGTTTGCT GAAAATAGGT TGTCATATTG CAACCCTTCA ATTACGCTAA AAACATGGTC CAACAAGCGC AACCCATTTC CTTGTCGCCG GCGAAATGGT ACCGCGGCGT AGGCGCTAAC ATGGTGAATA TGGGAAGCTG CACCATGATT CAGTTTGCCG TTGGCGGAAA GCTAAAGAAT CTTGTACTCA ATGGTGATAC GCGCAATCTC TCCCTGGCGG AAGAAATGTC CTGCGGTATT GGTGCAGGGA CGGTATCCGC CTTGGTCGGT AGTCCACTCG AACTGATCAT GATTCAACAA CAGCGCAAAG GAGGTAACAC GCTATCGACG ATCAAGAATA TTGCGGCGAA CCCGGTCAAC ATTTCGCGTG GTTTCGTCGG CGCTGCTGTC CGAGAAGCCT TGTGGACCTG TGGCTACCTT AGTATCCCTC CTGTCGTTCG TCGGACTCTT ATGGAAAGTT ATCCGGAACA GTTTCCGGAC AAAAATAAAG CACGCGTTCC GGCCGCATTA TTGGGTGGCC TGTTTGCCTG CTACATGACG CATCCGTTCG ACACCATTAA AACGTGCATG CAGGGTGATA TTGAACGCAC TGCCTACGGT ACGTTTACCC AAACGGCCAG TAAAATTTGG GGAGACTCAT CGTTACCGGG CTTTTATCGT GGTGCCACCT TTCGGTACGG ACGAATGGTG TGTGCTGTCT TCATCATGGA CTATATGAAA GATTTTATGG GCCAGCTCAT GTATCCGGAA GCCTTCAAGT AG
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Protein sequence | MSSNLNEVQN ATVGMTVGVI EVVILQPFNY AKNMVQQAQP ISLSPAKWYR GVGANMVNMG SCTMIQFAVG GKLKNLVLNG DTRNLSLAEE MSCGIGAGTV SALVGSPLEL IMIQQQRKGG NTLSTIKNIA ANPVNISRGF VGAAVREALW TCGYLSIPPV VRRTLMESYP EQFPDKNKAR VPAALLGGLF ACYMTHPFDT IKTCMQGDIE RTAYGTFTQT ASKIWGDSSL PGFYRGATFR YGRMVCAVFI MDYMKDFMGQ LMYPEAFK
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