Gene PHATRDRAFT_47843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_47843 
Symbol 
ID7203072 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011683 
Strand
Start bp218456 
End bp219447 
Gene Length992 bp 
Protein Length268 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182348 
Protein GI219124097 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.136219 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTTGTCCTTC ACGAATCGCA ATAACTGCAA CGGAACCATG TCTTCGAATT TGAATGAAGT 
TCAGAATGCT ACTGTCGGTA TGACGGTTGG CGTTATCGAG GTGAGTGTAA ACAAGAAGCA
GTTCCGTTCA AAAGCTGCTC CGCGTCGGTT AAGTCGCTGA GAGTAGTATG GTGCAGGAAA
CCAGCCGTAT GTTGTTCGAA GAGATGTGCA TTATTTGAGG ACTAACGGTT ATCGTTTGCT
GAAAATAGGT TGTCATATTG CAACCCTTCA ATTACGCTAA AAACATGGTC CAACAAGCGC
AACCCATTTC CTTGTCGCCG GCGAAATGGT ACCGCGGCGT AGGCGCTAAC ATGGTGAATA
TGGGAAGCTG CACCATGATT CAGTTTGCCG TTGGCGGAAA GCTAAAGAAT CTTGTACTCA
ATGGTGATAC GCGCAATCTC TCCCTGGCGG AAGAAATGTC CTGCGGTATT GGTGCAGGGA
CGGTATCCGC CTTGGTCGGT AGTCCACTCG AACTGATCAT GATTCAACAA CAGCGCAAAG
GAGGTAACAC GCTATCGACG ATCAAGAATA TTGCGGCGAA CCCGGTCAAC ATTTCGCGTG
GTTTCGTCGG CGCTGCTGTC CGAGAAGCCT TGTGGACCTG TGGCTACCTT AGTATCCCTC
CTGTCGTTCG TCGGACTCTT ATGGAAAGTT ATCCGGAACA GTTTCCGGAC AAAAATAAAG
CACGCGTTCC GGCCGCATTA TTGGGTGGCC TGTTTGCCTG CTACATGACG CATCCGTTCG
ACACCATTAA AACGTGCATG CAGGGTGATA TTGAACGCAC TGCCTACGGT ACGTTTACCC
AAACGGCCAG TAAAATTTGG GGAGACTCAT CGTTACCGGG CTTTTATCGT GGTGCCACCT
TTCGGTACGG ACGAATGGTG TGTGCTGTCT TCATCATGGA CTATATGAAA GATTTTATGG
GCCAGCTCAT GTATCCGGAA GCCTTCAAGT AG
 
Protein sequence
MSSNLNEVQN ATVGMTVGVI EVVILQPFNY AKNMVQQAQP ISLSPAKWYR GVGANMVNMG 
SCTMIQFAVG GKLKNLVLNG DTRNLSLAEE MSCGIGAGTV SALVGSPLEL IMIQQQRKGG
NTLSTIKNIA ANPVNISRGF VGAAVREALW TCGYLSIPPV VRRTLMESYP EQFPDKNKAR
VPAALLGGLF ACYMTHPFDT IKTCMQGDIE RTAYGTFTQT ASKIWGDSSL PGFYRGATFR
YGRMVCAVFI MDYMKDFMGQ LMYPEAFK