| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_47784 |
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| Symbol | |
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| ID | 7203034 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011683 |
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| Strand | + |
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| Start bp | 20321 |
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| End bp | 24363 |
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| Gene Length | 4043 bp |
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| Protein Length | 1317 aa |
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| Translation table | |
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| GC content | 53% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002182145 |
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| Protein GI | 219123674 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.686852 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | AACACGGTTC AACTCGCGTT GCAACGTCTG GATGTGGATC GTGTTTTGAA TTGCTTCTGT
TGTTGTTGTG GTCATTTTGT GAGTGTGGCA TGGCGTCTCG GAGCACGGGC GGTTCCCAAT
TTCGGGGTCG TCGACGGGGA GACGCGGTGC CCAACCGTAC GAGTGAGGAC GCTCGCAGCG
CCAGGGTTTC GCCTGCGCCT TTATGGATCG CGCCGCCGTC ACCAGTCCGT CGCGTCGACA
CGCATCCCCA TCCGAGCAGT AGTCATGGAA TCAACCGGCG CGGCGCCATT TCCGACGGTC
ATCCTCACGA TCGTCATCAC CGACGGTCCA ACAACCACAG CGACCTGGAT ATGTCGAACA
CTCCTCCGCG CGTGGATCCT CGGTCCAACT TTGCTCCACT CCGCATGCGC GCCGACTCGA
CGGGATCCAC CCGGGGGGCC TTTTACTCCG GGCACGTAAC GGCCAGCAAT ACCACCACGG
GTGCGACGCC AAACCCTGTC GGGGAAGCGC AACAGCCATA CCTACAAGAA CAGCAGCGTT
CTACCGGTAT GCGAACTACT GCGCCCCGGC GTCGTAAAAA GAAACCAGCC GGAGTCGCAT
CTTACCAAGA GCCAGCACCA AGAGCTCCAG CATTGTCTGA TCAAATTCGT CCCTCCAGCA
TGGCTGATCT GGCCGATCTA GCCTTTGCCT CGCTCGAAGG AGAAGATCTA GAGTTGGGCA
ACGGATCAGC GGAGTTGCAC ACCCTGGTCT CTCGCCGCGG ACGGAACGTG GACGGGAACC
ATCCATTATC GACAATGACC GACGGCAATA GATACAGTTC CGCAATTCCA GAACACTCTG
CCCGACCGAA CATCTTGGCT ACCATCAGGG ATGAATCTAG TTCTAGTCTC CGCGAAGTAC
CTACAGCGGC CCGTTCGCAA CGATTTTCCG ACAGTATGCG ATATTCTGAA AATTCCATGG
GTTCCTTGCT CGGAACAAAT TGGGTAGAGC GTGGCCCAGG AACTGGTGGC TCTCCCCGTT
CGTCTCTCAA TACAGCCTCC AGTAGGCAGC CACAGCGACC CCGAGACGAC GAAATTGCTA
TGTTTTCCTC TTTGGTACAT GCCGACTACG GCGCTACCGG TGGCGAACCC GTTAATGTCG
CTGCTGCCGT CGCGCTTGAA CACGCTGCCG AAGAGCAAAA ACACCTCCTG AACGAAACCT
TTTCGAGTGA CGACGATGAT TCGTCCGGAA CTTACAGCGA CGAAGAAACG GAGCACGACG
ACGTCCACCG GGGTTTTGCT GATCAGCTTG TCATTTTGTG GACTGCTTGG TTGACCCAAC
AAGCTCATTA CGACGAAGAT ACGGGTCAAC CATATTTCGA AGATGCGACC GGGTGGACTC
CGGCGGGCTT TGTTCGGCAC TACCTTTACA ACCCCTTGAC ACCCGAATTT ACCTCGCTCC
AGCAATTTTG TTGGGCAGTC ATTCTTGGTG TACTCATGGG CTTTTACACG GCCCTGTGGA
AGTACGTCAT TGAAACCGGC CTTGACTTTG TGTGGGAAAC AGTACCCACC TGGTTATTGC
AGGTGGGTGT CTTTACAGAC ATCGACGGTG CGTTTCCGCT TTATCACTAT ATGTGGATTT
GTCCATCTAT CTTTAGCGGA GTCCTATCGT ACGTTTTCGT CGTGTTGCCA ATAAAAATTC
CGGATCAAAA CGAATGGATC AACTGCGTGC ACACACGTGG CGTCCAAGAT TACCGTACAT
TTGGCACTCT CTTTGTCCTC TCGACGCTCG GTATGCTTTC CGGTCTTAGC CTTGGACCGG
AATTGCCTTT AGTACTGACA GCTGGTATGG TCGGTTCCTG GCTGGGCCTA GTGTGCAAGC
AAAGTATGCT GCAGGCGAGA GTTATGAATC TGACAGCCGC TTCTGCTGCG GTGGGAGGAT
TCTTCGGTTT TCCTATGGCA GGAGCCTTGT TTGTGCTGGA GCTCCCTCAT CGAATGGGGC
TTCAGTACTT TGAGGCTTTA TCCCCGGCGA CTATTTCGTC GATTGTGGCC GTTCTGGCTA
ATCGATTGAT TACGGGCAAC GATGTCACAG GTTACTACAG CTACCCGTTC CTAACAGCGA
CCTTGCCGAG TGAGATTTTC ACTAGTGCTA TTGTGTATGG CTTGTTCGGT GCAGGTGTGG
GTATTATATA CGTCAAGTGG GTAGTGTGGG GCAAAACGTT GGTTCACGAT TGGTTCCAGG
CACCACGCGA AAATGACATT AGTCCAATAA CTGCTCCTGC GGACCACTCG GGAAATGGAG
TAAGAGAAGA AGTCATATCT TTGGTGTCGC AAAAGGTTCA GAAAAGCATA CCGGAAAATA
GAAGCATGTT GTCCCGCACG ATAAAATGGT TCCGCTGCGT CATCAAGGAA GAACCGAAAC
GAGCAGCTGT TGCCGGTGCT CTTGCTGGAT TTATAGTGGG CGTGATTGGA ATGTTCGTTC
CTCATACAAT GTTTTGGGGC GAAGCACAGC TCCAGAATTT GATTGATAAG GGACGCACTC
CTCTTCCTAT ATTTGGCCTC GCTGGTGAAC CAACTTCAGC TTTAGTTGCG CTCGGCTACT
GCATGATAGA TCCGAATGAT CCAGAAGCCG TCAAGGCTGG GTTTGATGTA GGCTGTTCTG
CTGTGATTTC ATTTGCAAAA ATCGTCGTGG TGGGTCTCAG TCTTGGTACG GGCATTATTG
GTGGTCAGTT TTGGGGTCCG CTATTCGTCG GCTGCTCAGC GAGTCATCTT TTTACTGATG
CGGTCAATAT GTTTGCCGAC AAGTTTGGCT TTGGACAAAG CCTCGCCGCT TATCCCTGTG
TCGTTATCCT ATGTACGATG GGTAGCGCTC ATGTTGTTAC ATTTCGTGCC CATATGGCTA
TTATGCTAAT TCTGACTCTG ACAATCAGCG CATTCGACCC AGATGGTGGA AGCAGTATTG
GTGCTTTCAA AGTAGCCGGT GATTATTCCG CTGTTTTCCC GCTCCTTGTT GTATCTGTGT
TCGTCGCTTT GATGGTCTCC CGTGGGACGG TCTTTTACAA GACGCAGCGA TCACGGGGCG
ACATTATGGC CGTACCGGAA GTCTTGTGTG AACCAGGTAT GGAAGGTCGC CCTATGATTA
TGGACTTTGA CATTGCGGCA GATGGAGCCT CTTTCATAGA TGCTGTAAGT GACACGGATG
AAGATTACGA TGATCGTAAC GATACGAAGC TCTCCCCTAC TACCTCCTAC ACCGGGAGTT
ATCAAGTGCG CGCAGCAGAT GATGGTATGA CACAAATAGA CATCGAAAAC GAATTTGCTG
GGAGAGCGGT ATGGAACAAA GCAAGTTCTT TGCGACCCTC TGTTTCACGA ACTCAAGCGG
ATGTTCGCAT AGGGACGAAG GACGCTCCCC GCCAGTTTGT AGAATATGAT TCAGGCGGAA
TTATTCCTCG CTCTCTCTCA AACCCTATGA GTGTTGATGG AGAGCTACCA GGTCTGGACG
ACCTCCTTCG CCGGACGATG GTACCAAAGC CAACCTATGC TATGTCACCT CATCGGCATC
GGCGCACTCA AAGCGCTCCT ATTGCACCTG AGCCTTCCTT TTCCGGAGGC GGTAGTGCGA
GCCCCGACGT AAAGCGTGTG GAACGCTCAC GTGGTCGCGA CTCTTTCAGA TTCGATATCC
CGATACGGGA ACGAAGCAAC AGTGGGAGTA GCCGTGGGAG CTTAGTTCGT GTCACCAGTT
ATGGTGAGCT GCAGCAACAG CAGCCATCTT TGTTGGACCA AGCCCGTATG CGAGCGGCTT
CGTCGGCTGC TGACTCGCGT CATCACCGCG TGCCAAGTCT GCCCTCAGGT CGACACTCTC
GCAAAAATTC CGAGTCCAGC ATGAGCTACG TGAATACAAA CAATATTTCG GCAGTTGGTA
CAGACGACTC TGGTGCGCTG ACACTCGATG ATATCGAAAA GTCATTCCAA AACGTTATGA
ATAAGCAACT AATGGGCAAT TTACCGCAGA GCCGCTCGCC CTGGACCAAC AATGGCAACA
GCGGAAGGTC GACTGGCTCT TAA
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| Protein sequence | MASRSTGGSQ FRGRRRGDAV PNRTSEDARS ARVSPAPLWI APPSPVRRVD THPHPSSSHG
INRRGAISDG HPHDRHHRRS NNHSDLDMSN TPPRVDPRSN FAPLRMRADS TGSTRGAFYS
GHVTASNTTT GATPNPVGEA QQPYLQEQQR STGMRTTAPR RRKKKPAGVA SYQEPAPRAP
ALSDQIRPSS MADLADLAFA SLEGEDLELG NGSAELHTLV SRRGRNVDGN HPLSTMTDGN
RYSSAIPEHS ARPNILATIR DESSSSLREV PTAARSQRFS DSMRYSENSM GSLLGTNWVE
RGPGTGGSPR SSLNTASSRQ PQRPRDDEIA MFSSLVHADY GATGGEPVNV AAAVALEHAA
EEQKHLLNET FSSDDDDSSG TYSDEETEHD DVHRGFADQL VILWTAWLTQ QAHYDEDTGQ
PYFEDATGWT PAGFVRHYLY NPLTPEFTSL QQFCWAVILG VLMGFYTALW KYVIETGLDF
VWETVPTWLL QVGVFTDIDG AFPLYHYMWI CPSIFSGVLS YVFVVLPIKI PDQNEWINCV
HTRGVQDYRT FGTLFVLSTL GMLSGLSLGP ELPLVLTAGM VGSWLGLVCK QSMLQARVMN
LTAASAAVGG FFGFPMAGAL FVLELPHRMG LQYFEALSPA TISSIVAVLA NRLITGNDVT
GYYSYPFLTA TLPSEIFTSA IVYGLFGAGV GIIYVKWVVW GKTLVHDWFQ APRENDISPI
TAPADHSGNG VREEVISLVS QKVQKSIPEN RSMLSRTIKW FRCVIKEEPK RAAVAGALAG
FIVGVIGMFV PHTMFWGEAQ LQNLIDKGRT PLPIFGLAGE PTSALVALGY CMIDPNDPEA
VKAGFDVGCS AVISFAKIVV VGLSLGTGII GGQFWGPLFV GCSASHLFTD AVNMFADKFG
FGQSLAAYPC VVILCTMGSA HVVTFRAHMA IMLILTLTIS AFDPDGGSSI GAFKVAGDYS
AVFPLLVVSV FVALMVSRGT VFYKTQRSRG DIMAVPEVLC EPGMEGRPMI MDFDIAADGA
SFIDAVSDTD EDYDDRNDTK LSPTTSYTGS YQVRAADDGM TQIDIENEFA GRAVWNKASS
LRPSVSRTQA DVRIGTKDAP RQFVEYDSGG IIPRSLSNPM SVDGELPGLD DLLRRTMVPK
PTYAMSPHRH RRTQSAPIAP EPSFSGGGSA SPDVKRVERS RGRDSFRFDI PIRERSNSGS
SRGSLVRVTS YGELQQQQPS LLDQARMRAA SSAADSRHHR VPSLPSGRHS RKNSESSMSY
VNTNNISAVG TDDSGALTLD DIEKSFQNVM NKQLMGNLPQ SRSPWTNNGN SGRSTGS
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