Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_4339 |
Symbol | |
ID | 7203155 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011683 |
Strand | + |
Start bp | 350069 |
End bp | 351258 |
Gene Length | 1190 bp |
Protein Length | 222 aa |
Translation table | |
GC content | 44% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002182204 |
Protein GI | 219123797 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00625498 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GGCATTGTAT GCAATGACCG TGGGAGTATT ATTATACTCG ATCTCAAAGC TGAGAGACTC ACTGGTCGAA TACCTGAAGA GATCGGTCTT CTGAAGGAGT TGACTGTTCT TGATTTGTCA AGGAACTTTT TGGAAGGCCC TATCCCAGGA AATGCAGTAG GGAAGCTGAC CAAATTAGGT AAATCGATTG GATGCGCCTT TTGTTTTGAT TGAAGAATAG AGCACTAACC CTTTGATGAA ATGGTGTGAG GAAGAAAAAC TGTCGCTCGA GTACAATGAG CTAGGTTCCT CCTTACCCTC CGAAATTGGT CACTTGACGG AGCTTACTTC CTTAGCTGTC AACTTTAACT ATTTGACTGG GACTCTTCCT TCGGAATATA TTCGCCTACC TAAACTTGCA GCGTTTAACT CCAACGGTAA CATCGGACTC ACTGGCCCCT TCCAAGAACA TTTGATAGCA TGGACAAATT TGCAAGAGTT TTTCATACCT GGAACTCGCT TTACAGGATC CATTCCTGAT GAAATTGGCG AGCTCAGTGA CTTGCGGAGA CTGAGTTTCG ATGACACAAT TTTGGGGGGT ACCGTCCCCA GTTCGCTCAG AAAATTGACA AATCTTGAGA CGCTGTTTCT AGGAAGTCTT TCGATGTCTA TGAACATGAC TTCCATCATC GGCAATTTGT CATCTTTAAG TAAGTCGACA GTAAATGCTT CTTACAAAGA CTAGCTGACA TCTGATTGTA TTTTCCTATC TTATCTTATA TTCACAGTGG AACTCTCAAT TCGTGACTTA ACAATACAAG GAAACGTTCC AACAAGAATT GGTGCTCTCT CCAATCTTGA GTTTGCGCAG ATCACTGGTG CTGCCCTGAC AGGAACGCTG CCGACCGAAG TGGGCCTACT CACGAAGCTT CGCGTTATGA TCTTGGTATG CAGCTACCTC TGTTGTGTTG AGGACCCAAT GCCAAGGTAA ATAGAGGGCA CTCACAATGT TTGTGCGATA CACATAGGAT GACACAACAA TGACTGGTTC TTTGCCGTCC GAGATTGGAT ATCTGACAAA GCTCGGTAAG TCGTTTGTAG ATTTTTGGCT TTGTATGCAA CCATGATGAT TTACTCATCA ATGGTGTTTC AATCCAGAAA CACTCCAGAT AACTCGAAAT AACTTTAGCG GAATCATTCC GCAGTCGTAC
|
Protein sequence | GIVCNDRGSI IILDLKAERL TGRIPEEIGL LKELTVLDLS RNFLEGPIPG NAVGKLTKLE KLSLEYNELG SSLPSEIGHL TELTSLAVNF NYLTGTLPSE YIRLPKLAAF NSNGNIGLTG PFQEHLIAWT NLQEFFIPGT RFTGSIPDEI GELSDLRRLS FDDTILGGTV PSSLRKLTNL ETLFLGSLSM SMNMTSIIGN LSSLKTLQIT RNNFSGIIPQ SY
|
| |