Gene PHATRDRAFT_29177 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_29177 
Symbol 
ID7203146 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011683 
Strand
Start bp566419 
End bp567408 
Gene Length990 bp 
Protein Length185 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182254 
Protein GI219123900 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.669765 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTGTACTATT TTATATTGTG TTTCTATCTA TTCGTCCCCT TAACGGGAGT GTGTGCGAGG 
CCGGCACGGA GACCGTCAAG TCCGCAGGAG CAGCTCCTTC TCCTTTCCGG ACATCTCTAT
CTTGATTTAC CGAATCACAC GGCAAGGTGA GCATCGTGAG ACGTCTTTCT GGAGTTTTCC
TTCGACTCTC ATCCCAGTGG ATAGCTTGTA AATTTGGAGA TCACCGAGTC GTTTCGTTTG
GTTGGTTGTC GCGGAAACGG TGTAGCAGTT GAGAGAGTGT GGCTAGTCCC TTTGCTGCTT
GATACATATC AATGGTAGTG CATATCAGTA TCACGTATCT CATGCACTCC ATTCAATTTG
TTTTGTCTTT AGAATCCTTG ATTCACAATG GTCCGATACA GCGTGGAACC CGACAATATT
GAAAAGGTGG CGAAGTCTCG CGGATCCCAC CTCCGCGTGC ATTTCAAGCA TTGTCGCGAG
ATTGCCCACT TTACCAAGGG CATGAACGTC AACAAGGCGA TGAAGGTCCT CGACGACGTG
CTTGCCTTTA AGGCCGTCAT TCCCTTTGTC AAGTACACGG GAGGTATCGG TCGCAAGGCC
ATGGCCAAGC AGTGCAAGGC GCCCGGTAGC AAGGGACGTT GGCCCGTCAA GGCCACGGCC
GTCTATAAGG ACTTGCTTTC CAACGCCAAG GCCAACGCCG AAACCAAGGG CTTGGATATG
GACGCACTGA TCATTGACCA CGCGCAGGTC AATCGTGCGC CGGCCGGTAG GCGAAGAACT
TACCGTGCTC ATGGACGTAT CGGTAAGTAC GCCAGTCAGC CTGCCCACAT TGAGATCATT
CTCAAGCAAA AAGACGAAGG TGTGGAAAAG ATGGATGATG ATGAACCCAA GAAAATTACA
AAGAAGCAGG CAGCCAAGCG TCGTTTTGTC AAGGTTGGAG CTTAAACAAG CGTACTTCTA
CTTAACCTAA CTAAACACCC CAATCCAATG
 
Protein sequence
MVRYSVEPDN IEKVAKSRGS HLRVHFKHCR EIAHFTKGMN VNKAMKVLDD VLAFKAVIPF 
VKYTGGIGRK AMAKQCKAPG SKGRWPVKAT AVYKDLLSNA KANAETKGLD MDALIIDHAQ
VNRAPAGRRR TYRAHGRIGK YASQPAHIEI ILKQKDEGVE KMDDDEPKKI TKKQAAKRRF
VKVGA