Gene PHATRDRAFT_47763 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_47763 
Symbol 
ID7202925 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011682 
Strand
Start bp762925 
End bp763926 
Gene Length1002 bp 
Protein Length311 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182130 
Protein GI219123639 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CAGCTTACTT GCCCTGCATT TGCTTCATTC CGAAACGGTT CAACGGTTGT TTCCAGAGAC 
GATCTAATGT CAGATTCTCC GTCGCTGTAT TTGCTTTCGG ACACAATAGA TGCCTTGACA
ACGCCTGGTA CGCCAGTTTT CTGTACAGGC GTAATTTGGT GTATTGTCAC TGTCGGCACT
TGGCTTGTCT CGACTCTTAC AGGGAATTAT TCGCAGGTCG ACAAATTGTG GAGCATTCTA
CCGGCGGTGT ACGCATGCAT CGTTGTATGC GACGCTAGGA CTACGCTCAT GGCAGCAGTT
ACCACTTTTT GGAGCCTAAG ATTGACATAT AATTTTTATC GACGCGGTGG ATACGCGTGG
CCGCCGTGGC GAGGCGATGA AGACTATCGA TGGAGTTATG TAGCGCAAGG GAAGATGGTA
TCCATCTTAG CAAACCCTGT CGTATGGCAC TTTTTCAATC TAGCATTTAT CAGCATCTTC
CAGAATGTTC TGCTCTTGTT GATTGCGGCG CCGTCCATTG TCGCTCATGT CCACGCTGTC
TCGGTAGATT TTACTTCAGG AAACGCGCTC ACTAGCGTCG ACTTCATTGC TGCGTTTTCG
GCAATGACGT TTATATGCAT CGAGGCAATT GCTGACAATC AGCAGAACAC GTTCCAAACG
GAAAAGTACA GACGCAAGAA TGCAGGCGAA GCATTGGAGG GAGAGTACTT GCAGGGATTT
TTGCAATCGG GTCTTTTTGC GATTGTGCGA AAGCCCAACT ATGCTGCCGA GCAGTGCCTA
TGGACCTCCT ATTCTCTCTT CGCATTTAGC TGTACCGGTG TCATGATTCA TTGGTCTTAT
ATTGGATGTA TTCTTTTGGC GCTGTTATTC CAAGGCTCTG GCAGATTGAC GGAAAGGATT
ACCCGGGAAA AGTATTCTGC GTACGCTGGC TATCAACAAC GGGTGCCACT CTACGTCCCT
AGCTGGACGA TTTTGAGTAA CGGGAAAGGA AAAATTAGCT AA
 
Protein sequence
MSDSPSLYLL SDTIDALTTP GTPVFCTGVI WCIVTVGTWL VSTLTGNYSQ VDKLWSILPA 
VYACIVVCDA RTTLMAAVTT FWSLRLTYNF YRRGGYAWPP WRGDEDYRWS YVAQGKMVSI
LANPVVWHFF NLAFISIFQN VLLLLIAAPS IVAHVHAVSV DFTSGNALTS VDFIAAFSAM
TFICIEAIAD NQQNTFQTEK YRRKNAGEAL EGEYLQGFLQ SGLFAIVRKP NYAAEQCLWT
SYSLFAFSCT GVMIHWSYIG CILLALLFQG SGRLTERITR EKYSAYAGYQ QRVPLYVPSW
TILSNGKGKI S