| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_47754 |
|---|
| Symbol | |
|---|
| ID | 7202738 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011682 |
|---|
| Strand | - |
|---|
| Start bp | 737772 |
|---|
| End bp | 739117 |
|---|
| Gene Length | 1346 bp |
|---|
| Protein Length | 407 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002182124 |
|---|
| Protein GI | 219123627 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATGCTG TTTTGTACGG AGCGACCGAC AACAACAACA ACAACAACAA CGGCACCAAC
AAAACAGGAA GTGATGGTTC GGGAAGTGAT AAAGATGGGC GCCCCGTTTT CCCGTTTACA
AGTCTCGGCA ACGGCAAAGG GGATAACGGA ACCAATATTT CCATCCGGGG TCTTACCCTG
CTGTTGACCT TCTTGACGGT TGGAGTGCTG TTTTGCGTCT TGTTGCCTTT TGTCATCCCG
AGACTGCGTC GGATTTGGAG GCAACGCCTA GAAACGAACA ACGAGGAGGA TCATAGATCG
AGCGTGGACG AACAGGGCAG GATTCAGTTA AGGTATAGTG CCATTGAATC ATGGTTGGTG
AGCAAACAGG TCTTGGCGCA CGATGACTTG TGTCGCAGAG TTCTGCAGCA CAATGGCAAG
GAATGTTGGG AACCAGACAC ATCGGCACAC GGCAAAAACC GCTCGAAAGA ACGTACCATG
ACTGTAGAGA CGTTGATGTC GGCGGACGAC GACAGCAACG ACGAAAACCA CGGGGAGATT
TGGAGTGAAT GTGACAATGA AAATGAAGGC CTCGAATGTC CTGTTTGTAT GGATTCCATA
CAAGTGGGAG CCATTGTATC GTGGTCAGCC AATCCCAAAT GCAGGCACTA TTTTCACCAC
GCGTGTATCA AGGAGGTAAG CTTCATGCTG TGCCGTACTG ATTGCAACAA CAGTTGCGAT
GGCAGGTCCC AGCCTTAAAA TATTTCCTTA TTTCCCCTCA AAACATTTTC CTGCTCATTT
CTGCGCTTTC TCTTCAGTGG CTCCTCAAAC ACTCCGATTG CCCCTTTTGC CGTGAATGCT
TTTTACCGAC CGATCAAATG CCTAGCAAAC TATCCATGAA ACACATTTCG GAGCTCATTG
TAGCACAACA GCACCGATCA GCACACTGCT TCTTTTGTCT CGAACACGGT GTTGTTGCAT
TGCCTAACAA ATTAGAAGCC TGTTTTGCTG TAGACTCCGA CGGCACCAAG GCGCTATGGC
AACGAGCGTC TGCCGTACCG AGCCGCCAGG CGCTCGTAAC GTTACGAAAA GTTAATCACG
AACAAGATTA TTTGAATCGC ACTGGCTCGA GTCAAGAAGA CGAAGATGAT CTCGGCAATG
ATTCCGTAGG TTTTGCACAA GACAGTGAAT TTAACGCAAC AGCTTTGAAC AGCAACGAGG
ATACAAGCAA TGCTTTAAGT GCTGATGCCA GTAGTGAGGA GGTGGACATT GTTCCACAAG
CAGGAAGTAG CGTAACGGTT GCCTTCGGTG GAGCCGACGG TACGGTTGTG GATGCGGATG
ACGGCGGATT CAGACGCGAA AAGTGA
|
|---|
| Protein sequence | MYAVLYGATD NNNNNNNGTN KTGSDGSGSD KDGRPVFPFT SLGNGKGDNG TNISIRGLTL
LLTFLTVGVL FCVLLPFVIP RLRRIWRQRL ETNNEEDHRS SVDEQGRIQL RYSAIESWLV
SKQVLAHDDL CRRVLQHNGK ECWEPDTSAH GKNRSKERTM TVETLMSADD DSNDENHGEI
WSECDNENEG LECPVCMDSI QVGAIVSWSA NPKCRHYFHH ACIKEWLLKH SDCPFCRECF
LPTDQMPSKL SMKHISELIV AQQHRSAHCF FCLEHGVVAL PNKLEACFAV DSDGTKALWQ
RASAVPSRQA LVTLRKVNHE QDYLNRTGSS QEDEDDLGND SVGFAQDSEF NATALNSNED
TSNALSADAS SEEVDIVPQA GSSVTVAFGG ADGTVVDADD GGFRREK
|
|---|
| |