Gene PHATRDRAFT_47724 details

Gene Information

• Locus tag: PHATRDRAFT_47724
• ID: 7202902
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011682
• Strand: +
• Start bp: 641412
• End bp: 643378
• Gene Length: 1967 bp
• Protein Length: 646 aa
• GC content: 52%
• Product: predicted protein
• Protein accession: XP_002181946
• Protein GI: 219123260

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.642125
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGAACGG CTCTGGGAAA GGAAGACGAG GGTCAAATCC CACGTCAACT GGATGCCGTT 
ACCGAGTCGG AGCAGACCGA TCAACGAAAG AGCAATGCGG TCGCGGCAGA AAGCGAGGAG 
TTTCATCGAG CACCGCAACG CCAGACGCTA CATATGCGGA AGGAATCCAA AGAGTTTCTG 
AACACTATGC ATTCCTACTT GGATTGCAAA CGAAAATTGG AAGCCTTGGC AGGCAAAGTG 
GACCCCTGCC GAACACTGCA CGGCATGACG CTATATACGC ACTCGGGCGG AATACGCGAG 
GCGGACGGAA CCTACAAAGC GACTTATCGG CAGCAAAACC AATCTGGAAA CCCGGTTCGA 
GACTCGGAGG AACTCCTGCA AGCCGCCACG GTGACACGAC CTCTCTTTTT GGCGCTCATG 
CAACAACTAG CATCCCAAAT AATGCAAAAA CGACAAGATC TGCGCCGGGA CGGTGCGCAA 
TTCAAGGCAC TGGTCGAACT TCCCCTCAAA GCCTGGTCGA GGATTGTGGA AAAGTCACGG 
GACGACTACG CGAAACGGAC ACCGGGTCCA CCGGAAGCAT GGCTCTACGA TCTCAACCGC 
GCTTCCGTTC TTTGCCCTGA CGTTGCCACC ATGGACGCCG TCGTTACGTG GCTTTACAAA 
AATACATATA TTGTTACGGC CAAGAATCGC TTTCATCGGC CCACTATCAG CGGATACCGT 
GACTTGCTCT TTGTTTTACG GATACCCGTG AGACCCACGG ATCAACAAGG CGGTACCGGT 
TCACCCGCCA ATCCTGTTCT ATTTTTTCAC ATGTGCGAAC TGCAAGTGCA TCACGAACAA 
ATTTGGCAAC TTAGCAAAAC ACTGGAGACG CACAGGCTAT ATCGATACTT TCGCTCCTAC 
TTTTGCGGCA ACGACGAAGC CAGTGTCGGG AAGCTGATGA CAGAACTGGT TGAAATTGAA 
GATTCTGGCA AACTCGATAC GATGGTTGTA CAGCGAGTGC TGGAATCGGA CGACGTCCCG 
CGGATACGCA AGCTCACCGA GCTCTTTCAA CATCTGCCAG AGCACGATTT TGCCCTACTC 
TTGTCCCAAC GCGCTCTCGA CATTCACGTG GCGGCCGAAC CGGATGCTCC TAGCCATAGC 
AAGCATGAAA CCCACCACAG TCATCGTATC AACGTTGCCG AATCGTACAA CCATATTGGC 
GACATACTTT TGGCTAAGGG AGAGTATCTT AGTGCCTTGA CGCACTATCG ACAGGCACTC 
GATATTTACC TACAGACGCT TGGCCCACAG CACGTCCAGA CGGCAGCGAC ACACAACGCG 
ATTGGTCTAG TGCTATCCAA TCAAGCATCG TACGACGAGG CCTTGATTCA TTTCGAAAAA 
GCACTCGCAA TTTTTTCAGC GCCCGGGGGA GACAGCAGCA GCAACAATAC CGACCAGAGT 
ATCGCCAAAA ATGCCCATCC CCAGGCCGCC ACCGCTTGGA TTTACATTGG TCACATTGCC 
CAGGCTCGTG GAAATCTGGA GCAAGCTCGG GAGAATTACG AAAAAGCGCG TGCAATCGCT 
TCGGCGCTGG AGGAACAGCT ATACGGAACG AAACAGACTC TACTCGCCAC GACAGAAACG 
AATTTGGGAA TTGTAAGCTA CCATCAGGGG GACCTGGACG ATGCCTTGGT GCACATGCAA 
CAGGCATTGG CTACCCGTCA AGCTGTTCTG GGACGTAAGC ATCGTCAAAC TGGTCTAGTC 
CACGAGGCAT TGGGAACAAT TTGGCGTGAT CTGGGAAATT TGGAAACCGC CGCTGAACAC 
TTCTGTCAAG CGAACAGCAT TGATCAAGGA ACAACATGTG ACTGGGAACG CTCGCTATTG 
AAGAAACGGT TGCATTGGAG CACAGGGGGA CTCTCTATCG ATGAGAAAGT GAGCCGGACT 
TCTACAGAGG AGTTACCGTA GCTCTCAGGG ATAGGTGCAC GACTGAT 

 

Protein sequence

MGTALGKEDE GQIPRQLDAV TESEQTDQRK SNAVAAESEE FHRAPQRQTL HMRKESKEFL 
NTMHSYLDCK RKLEALAGKV DPCRTLHGMT LYTHSGGIRE ADGTYKATYR QQNQSGNPVR 
DSEELLQAAT VTRPLFLALM QQLASQIMQK RQDLRRDGAQ FKALVELPLK AWSRIVEKSR 
DDYAKRTPGP PEAWLYDLNR ASVLCPDVAT MDAVVTWLYK NTYIVTAKNR FHRPTISGYR 
DLLFVLRIPV RPTDQQGGTG SPANPVLFFH MCELQVHHEQ IWQLSKTLET HRLYRYFRSY 
FCGNDEASVG KLMTELVEIE DSGKLDTMVV QRVLESDDVP RIRKLTELFQ HLPEHDFALL 
LSQRALDIHV AAEPDAPSHS KHETHHSHRI NVAESYNHIG DILLAKGEYL SALTHYRQAL 
DIYLQTLGPQ HVQTAATHNA IGLVLSNQAS YDEALIHFEK ALAIFSAPGG DSSSNNTDQS 
IAKNAHPQAA TAWIYIGHIA QARGNLEQAR ENYEKARAIA SALEEQLYGT KQTLLATTET 
NLGIVSYHQG DLDDALVHMQ QALATRQAVL GRKHRQTGLV HEALGTIWRD LGNLETAAEH 
FCQANSIDQG TTCDWERSLL KKRLHWSTGG LSIDEKVSRT STEELP