Gene PHATRDRAFT_47704 details

Gene Information

• Locus tag: PHATRDRAFT_47704
• ID: 7202708
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011682
• Strand: -
• Start bp: 583076
• End bp: 586664
• Gene Length: 3589 bp
• Protein Length: 1183 aa
• GC content: 54%
• Product: predicted protein
• Protein accession: XP_002182093
• Protein GI: 219123565

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTGGTC CCAACGGCAA AGGCGGTCGC AACCCCAAAA AGAAGAAGAA AAAGAAGACT 
TCTCCGTCGA ATCGACTCGT TGACGGGGAT TCTTCCGTCC CGCAAAACGC AGTGACTGTG 
AATAGTACCA TTCCGACGAA TACGATCACG ACGAACGGTA CTTCCGAGGC GGCCACGGAC 
TGGTACCACG CCGCACTCGC TTGCAAAGAA CAAGGCAACG CCGTCTTGGC GTCGACCACA 
CCGCTGCACC GGGACCCTAC CACTACCAAC CACACGAATC CGATACAACA AGCGGTAGCG 
GACTACCAAC GAGGCTTGGC GTGCCTGTCC GCCGTGGCCG ATACCCCCGC CGCGGCGACG 
GAGTGTTGGC GGGATTTACG CACGCAATTG CACGGCAACT TGGCCATTGC CTGGGCCAAG 
CTTGGTGACT ACGAGGCGGT CGAAGCCGCT TGCTCTCTGG TACTGGACAG TCCCACGAGT 
GCCGCGGATG TGGCGACCGC CAAACTCTGG TACCGTCGGG GGACGGCGCG GTACGAACGA 
GGCCGACACG GACCGGATGA CGCTCTCCTA CACGCGAGTC ACGACGATTT GCGGCACGCA 
CAAATTCTAC TCGAACAAAT CGACAACAAC GCTAGTAAGA GTCACCATCA CAACAATAGC 
AACAACACTA TGCAACAGAG CGTACAGAGT GCCATGCAAA AGACGACACG AGCTTTGGAA 
GAATGCGCAC GTATGTGCAA CCGAAGTTCC AACTATTCTT CGAACGGCAC TAGCGAAGCG 
ACCGTCGACA TCTCCATGTC ATTGGCAAAC GTTACAGCAG TCCGTCCCGA ACGACCCGAT 
CCGTTGACGC AACGCGACGA CGTACGTAAA TTATTGTTGG CTCGACACTG CGGATTCGCT 
CAGCAGCAGC AGCCTCCATC ATACGGAAAC GGCCACGGTC ACTGCGCGAG CGAAACAGTC 
GAATCCACTG CAGGAGAAGC ACTCTTTTTG ATAGATTGGG ACTGGTGGTG TGACTGGTGT 
TACCACGTCG GCCTTTACGC CACCAACGCT CCACAAATAC AATACTACAT GGTGCAGGGT 
GCCGTCTTGC CGGATGAAGA AGAGGACCGC GATATGGATC AGTCCGACGC GCCTCCCGGT 
CCCATTGACA ATACCGCACT CTTCCTCTTG GCACCCCAAG TATGGCACGC CAAGAAAACT 
CTTTCTACCG CCCAACACTT TTACAAAACC TGGTATCTTT CCTACACAAC CACGCATGGC 
CATACCACCA CTGTAGACGA TATTGTGCCA CCACTCCAAC CCCACCTGGT CCGCGGCTAT 
CACTACGAAT TATTACCCCG GGAAGTTTAC GCCGCGTTGC GTTTGTGGTA CGGGGAACTG 
ACACCCAGCA TTTGTCGTCG CGTATCGGTG TCCCGTCACG TGCCCACGGT ACACCTCCAT 
CCCCAATCAC CAACACTACA ACCAGCGACC GGACCAACGT CGTCTTTCTG TTCCGCTTGT 
TACCGAGCGG GGGCGACCAT GCGTTGCAAA CGGTGCATGT CCGTTTACTA CTGTCAGCGC 
TCGTGTCAAG AATCGCACTG GCAATTTCAT AAAGCTCCCT GCAAGCGGTT GGCAGCCACC 
AACACGGAGG AGACCGTAGG ATCGCCCGTC TTACCGCCGC CATCGTACGG TCGCGTTGGT 
TTACATAATC TGGGCAATAC TTGTTTCATG AATTCCGCCT TGCAATGTTT GAGTCACGCG 
ACGCCACTGA CTCGGTCCTT TCTGTCTAAC CTGTACTTGA TCGACGTTAA CGTTGACAAT 
CCCTTGGGGA GCGGTGGGAA CCTCGCACAC GCCTACGGCG CGGTCTTGAA GGATCTGTGG 
ATGAAATCTA ACACGACTTC TCTCAGTCCC ACCGCGCTGA AACGAGCAAT CGCCATGTTC 
GCCCCGCGTT TTGCCGGATG CCTGCAACAC GACGCACAAG AATTCCTGGC CTATTTGTTG 
GACGGCTTGC ACGAAGATTT GAACCGGGTG CGACAAAAAC CGTACGTGGA AATGCCCGAC 
ATTACTCAAG GGCAAAACAT GGCCGTCGCC GGTGCACGGG CTTGGGAGGC CTTGCGCCGG 
AGGGATGATT CGCTCGTCAT GGATACCTTT TACGGACAGT TTCGATCAAC CTGTGTCTGT 
CCACGATGCC AACGAGTGTC CGTCTCCTTT GACGCTTTTA ATCACGTGAG CTTGCAAATC 
CCGACATCGG TAAACGCAAC AATCTCCGTC GGGGTATTTG TTATGGGGGA AAGTGGACGT 
TGGACAAGAT ACGGGGTCAG CCTACCTAGG ACCGCCACCA CCGCGACTTT GCGATTGCAC 
TTGACAGAAT TGTGCGGTGG GAAAGATTTG GCGCGGCTGG TTCTTTTGGA AGTATTCCAC 
AATGCCATTG TTCGTGTCGT AGACGAAACG AAATCTGTGG GGCAGTTGCA TCCCAACACC 
GTCCTGGCCG CTTTTGACGT GGATCCTCTG ACGGGCAATG CTGATCCAAC CTTTCACGTG 
TGTGCCAGCC ACAAGCTACT CCCGGAGGAT GGGGACAACA ATTTGGACCA GCCAGAGCTG 
TTTGGCTTTC CCTTTATGAT TTCCTTCTCG GGGAAAACGA CGTGTCGGCA AGCCTGGGAA 
CATCTTTGGT CTAAGGTGCA ACATTTGGTG GCGCACGGAA GCGACGAACC CGACTCGAGT 
GCCCGCGATT TACTGCAAAT TCATCTGCAC GATCACCGGA ACCAGCGCCT ACCCGTGTTC 
CCAGTGGCCA ATCTCGATGT CACCTTGGCG GAGATGGACA ATGCAATGGA CACCGAATGC 
ACGTCCGCTC TCCCTCGAGA TTCGGACCTC AGGCTTATCG ACCTTCTGGG CCCCAAATCC 
ACTGACAACT ACATATTTTT CTGGCTGGAA TGGCAAGAGA GCCCAGACGT TGTTTTAGGA 
AGTGTCCCAG GAGAAAAAGG ATTGGAATCC AGGATTGATG AAGAACGATT TCTAGCTTTT 
GAAAGTGATG CGAGCTGGTT GTTATGCCAG AAGAGGCAGA GAGCACAAAG TTTGGCAAAA 
GGAGTGACGT TAGACGAGTG TTTCGAAACC TTCATTCAGC CTGAACGTTT GGATGACAAC 
AATATGTGGT ACTGCTCGAA TTGCAAGGAT CACGTTCGAG CCATGAAGAC TATGGAACTC 
TGGCGGTTGC CAAATGTTCT GGTCGTGCAC TTGAAGCGCT TCGAGTTCCG CAATGTGCTG 
CGGCGAGACA AATTAGAAAC TCTGGTCGAT TTCCCCCTGG ATGGGCTGGA CATGAGCAAG 
CATTGCGGGT CGTATTCGTC CAGGTCGTTT GAAGACGAAC ACGTTCCGGC CACTTACGAT 
TTATTTGCCG TGACGAATCA CTTCGGACGA ATGGGATTTG GCCATTACAC CGCATTTGCC 
CGACGATGGG ACGAAGAGGG CATCCATAAC GAGCACTGGG CACTCTTTGA CGATTCAAGC 
GTACAGGAGG TCACCGATGA GAGGAATATA GTGTCATCCG CAGCGTACGT ACTCTTCTAC 
AGACGTCGAA CCTTTCATTA GATGGTGGAT CTTTTGCGAA GGGAATTAA 

 

Protein sequence

MAGPNGKGGR NPKKKKKKKT SPSNRLVDGD SSVPQNAVTV NSTIPTNTIT TNGTSEAATD 
WYHAALACKE QGNAVLASTT PLHRDPTTTN HTNPIQQAVA DYQRGLACLS AVADTPAAAT 
ECWRDLRTQL HGNLAIAWAK LGDYEAVEAA CSLVLDSPTS AADVATAKLW YRRGTARYER 
GRHGPDDALL HASHDDLRHA QILLEQIDNN ASKSHHHNNS NNTMQQSVQS AMQKTTRALE 
ECARMCNRSS NYSSNGTSEA TVDISMSLAN VTAVRPERPD PLTQRDDVRK LLLARHCGFA 
QQQQPPSYGN GHGHCASETV ESTAGEALFL IDWDWWCDWC YHVGLYATNA PQIQYYMVQG 
AVLPDEEEDR DMDQSDAPPG PIDNTALFLL APQVWHAKKT LSTAQHFYKT WYLSYTTTHG 
HTTTVDDIVP PLQPHLVRGY HYELLPREVY AALRLWYGEL TPSICRRVSV SRHVPTVHLH 
PQSPTLQPAT GPTSSFCSAC YRAGATMRCK RCMSVYYCQR SCQESHWQFH KAPCKRLAAT 
NTEETVGSPV LPPPSYGRVG LHNLGNTCFM NSALQCLSHA TPLTRSFLSN LYLIDVNVDN 
PLGSGGNLAH AYGAVLKDLW MKSNTTSLSP TALKRAIAMF APRFAGCLQH DAQEFLAYLL 
DGLHEDLNRV RQKPYVEMPD ITQGQNMAVA GARAWEALRR RDDSLVMDTF YGQFRSTCVC 
PRCQRVSVSF DAFNHVSLQI PTSVNATISV GVFVMGESGR WTRYGVSLPR TATTATLRLH 
LTELCGGKDL ARLVLLEVFH NAIVRVVDET KSVGQLHPNT VLAAFDVDPL TGNADPTFHV 
CASHKLLPED GDNNLDQPEL FGFPFMISFS GKTTCRQAWE HLWSKVQHLV AHGSDEPDSS 
ARDLLQIHLH DHRNQRLPVF PVANLDVTLA EMDNAMDTEC TSALPRDSDL RLIDLLGPKS 
TDNYIFFWLE WQESPDVVLG SVPGEKGLES RIDEERFLAF ESDASWLLCQ KRQRAQSLAK 
GVTLDECFET FIQPERLDDN NMWYCSNCKD HVRAMKTMEL WRLPNVLVVH LKRFEFRNVL 
RRDKLETLVD FPLDGLDMSK HCGSYSSRSF EDEHVPATYD LFAVTNHFGR MGFGHYTAFA 
RRWDEEGIHN EHWALFDDSS VQEVTDERNI VSSAAWWIFC EGN