Gene PHATRDRAFT_47622 details

Gene Information

• Locus tag: PHATRDRAFT_47622
• ID: 7202825
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011682
• Strand: +
• Start bp: 310766
• End bp: 315482
• Gene Length: 4717 bp
• Protein Length: 765 aa
• GC content: 48%
• Product: predicted protein
• Protein accession: XP_002181882
• Protein GI: 219123127

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GACGATCCAG ACGTCTCCTT TACATAACAT TTTGATCCGC GATAAGAAAG CATATATTCA 
CATTCCATGC GTACTGATGG AGGAGGCGTT GTCAGAAGAC GCGAGCGGGC GGAAGCCAAG 
CCATTGTTAC TTCCCGTTAG AGAGTGCATT TTACTCGTCG TCTTTTTGGC AATCCAAGCA 
TCATGTTTTA TGACACAAGC CCCAGCACGA AGGTCAGTAC ATCCTTCAAT AAACACTGGA 
AGCGTACACC TACGTTTTGC AAGGCGACGA CTCTTCCTAT CTCGGATGCC GATTCCACAG 
GTTTATCTAC CGACCTTATC TGCCTCTATT GCAAAATCAA CATCACCGGC TGATCGCTCC 
CCAGACTATG CCTCGAATCG ATCATTGTCA AAAAAACGAA AGCGAAACAC GAAACGCTAC 
GAAATTCGTC AATTGTTTCA AAAAGCCAAA GATCTCGAAC GCAAAGGCCA CTGGCGCAAG 
GCAGCCGACG TACTCAATGA AATTTTAGTT TGGGATCCAG CCGACGCTCA CAGCCACCTT 
GCTCTAGCGC GACTGGAAGG CCGCCGCTTT CCAGATACTA ACAAAGCATG CGAAGCCTTT 
GGCAAAGGAA CTGAAGCTTG CCCGAATTCG GTGCATCTTT GGCAGGCTTG GGCAGTTCAT 
GAGGATTCCA GTGGTCACGT TGATCGTGCC AGAGAACTTT TTGAGAAGGC TCTGGCAATA 
GATCCGCACA ACCCTTATGT GTGCCATGCG TTCGGACTGA TGGAGCGAAA GCTGGGCAAT 
GTGGAATCAG CGAAGAAATT ATGGGCTCTA GCGCTACAGA AAAAAAGTAC CGCTGCTTTG 
GTTTGTCAAA TGGGAGAGCT GTTCATTGCT GAGAATCAGC TGGACCAAAC AAGAGAATTG 
TATTCAAAGC ATCTGCTACG GCTCGAAACA GCCAAAGATC GAACCGAAGT CTACTTGGCG 
GCAGCCTGGT TAGAAGAACG CTACTTCACT AACTATATCA AAGCGGAAGA ACTCATAAAG 
AGTGCTCTAG CGCTGAATCC TAGTAGCAGC GTGGCCCACG TGGCATTGGC TCGACTCGAA 
GGCAGGAATC GGCAGCGCAT ACGAGGAGAA GGGTACGAGA GTGCCACCGC TAGGCGATTG 
GCTAGTGCCT GCATAAGCCT TGAGACTGAA GGAAACACTG TGCAGCCAGA CGATGGTCGA 
GTCTTTAATG CCTGGGCTCA TATAGAAATC AAAGGACGCC GATTTTCATC GGCGCGTAAC 
ATCCTGCGTC GGGGCTTGAG CAGGTACCCG GAAGACTATT CACTTTTGCA GGCGGCAGGA 
ATATTAGAAG AACGCGTGGG TAACTATACT GGAGCTCGGG CTATATATGG CAAAAGCCTG 
CGGATACAGC CTGCTGCTCC AACTTTAGTC GCCTACGCTC TTCTGGACTT GCGGCACCCT 
TCATCCGGAG AGGCCAACTT TACCAGAGTT AAAGCGCTCT TCGAAGAAGC CATACTGTTG 
GATCCTCGCC ATGGCCCAGC CTACAATTCT TACGGAAATC TTGAACTTCG ACAAGGAAAC 
ATCCGAACAG CACGTAACAT ATTCGAACGT GGTATCTTAG CCCACTGTTC GGATGTGGCT 
TCTGTCTATC ACGGCTACGC CCGTCTGGAA TTGTCCATTG GAAATGTGAA GAAAGCTCGA 
GAAATTTTAG TAGATGGCAT TCGTGAGGCA TGCCAGCAAG ACGCTGGCAT GGATTCGCCA 
CATCGTGAGC GAGCACTGTT CCTTTCACAC ACGTTAGGAA TGCTTGAGTT AAACAGCAAT 
CGTCCTATAG ACGCTCTGAG TATTTTCATC GACGGCGTCA ATCGGTACGG TAATTCTTCA 
CAGCTTCTTT TGGGCGCTGC CCTTTGTGAA GTAAAGCTCG GGAATGAAGT CAATGCCCGT 
ATGTTGTTTG AGCGATCACT ACTGGTCGAC GAGAAGCACC CTCAGGCGTG GCAGGCTTGG 
GGCGTCATGG AGCTTCGGGC GGGAAACACG CTTACAGCTC AAACTCTCTT TGAATGTGGC 
ATCAAAGCGG CACCGAAGCA TGGTGCTTTG TGGCTCGCTT ATGCAATTTC TGAAGGAAGA 
CTTGGAAATC CAGAAACGGC CCGGTCTCTC TTCGCTAACG GTATAAAGCA TTCGCCTAGA 
CACATACCGC TATATCAAGC TTGGGCATCC TTGGAACTTC GGGAAGCTAA CTACAATGCT 
GCGAAAGCCT TGATTAGCGA GGCCCTAACC CGAGACAAGC GAAACGGCTC AGGATGGCTG 
GTTGCTGCCG AGATAGAAAA GAGTCTTGGT AACGCAGGAC TTGTCAATCT TATACTAAGA 
AGAGGAATTG AGTGCGCACC GACAAATGCT GAGCTTTATA GAGCCCTTGG AGACTCATTG 
CTTCAGCGTG GAAATGTTCT GGAAGCTCGT GAGATTTTTG AGAAAGGAAT TGATGTCGAT 
CCTCTCCATG CCCCGCTATA TCACTCGTTG GCAGAGCTCG AAGCCAGAAT ATTCAACGTC 
GAAGGCCTAT CAAAATTAAA CGCAAGGGCC ACTAAAGTGT TTAAGACAAA TGCTCTGGAG 
CCTCCAAGCA CTGCGGGTGA GGAAGCATGG GGTACAAAAA TCCGAGCCGG TCGTCTAAGT 
AGTACGCCCA CAGGGGTGAA GGCTTTAGCA GAGCGAATTG TCGAGGATGA CATCTCGGAC 
CTTTTTTTGA ATAACACCAA TCTGGACCTA TTCATTGAGA GCATCAGTGA AAGCCTCATG 
GAGGATGGTC TGGTGGGTCA ACTTTTCAAT ATGGAAATGG ACAGAATAGA AATTGACTCA 
GATGTTGCTA AAACCTAAAT ACCATGCTAC GCTAACGAAA GTAAAAGGGA ATTAACAGAA 
AATGAAAACG AAGTTTCAGT CAACTAAAAG GAGGGTCGCG CTCTTTGCGT CCAAGTCTGG 
CTCGTTTCCT TGCTAACGTC CGTGTCATTT ACTCGATGCA AAGTTTCTTC GCCTCGCCGC 
CCATAACCAT TCTGACTTTT CGTCTGTGCA GATGAAGCGA TGGCCTCAGC GTTTCTGAGC 
TCTGCTTCAG ACAACTTTAG GTTCTCAGTG AGTACATCAA TTTTATCAAT CATATATCGC 
TCTTCTTCGT CTCTCTTTTG CAAAGCCTCA ACAAGCGAGT GATTCTCAAC AAAGGCGTTT 
TGCAGTCTGG TTTGCGTCAC CTCGTATCTA CTCTTCAACT CCACGATTTC TTCGCGCAAA 
CGCGATTCGT TCTTTTGTGA GAATCCCGTG TTTCCACTCA AGTGAGACAC ATTCAAGCTT 
TGAGTTTCTT CGTCGCGCCT CCCGTAGCCA TTCTGATTTT TCGTCTGTGC AGATGATGTG 
ATGGCCTTGG AGTTCCTGAG CTCTGCTTCA GATAATTTTA GTTTCTCAGT GAGTACATCA 
ATTTCGTCAA TCATACATCG CTCTTCTTCA TCTCTCTTTT GCAAAGCCTC GACAAGCGAG 
TGATTCTCAA TAAAGGCGTC TTGCAGTCTG GTTTGCGTCA CCTCGTATCT ACTCTTCAAC 
TCCACGATTT CTTCGCGCAA ACGCGATTCG TTCTTTTGTG AGAATCCCGT GTTTCCACTC 
AAATGAGACA CATTCAAGCT TTGCGACATA TCTTCCAGAG CATCGTGCAG CTGCGAATTT 
TCTTTTTCAA GCTGTTGTAC TGCAGATTGC AACTCATGAA GCTTCTTAAC ATTTACATCG 
TTTGGCGTGG ATCGCGATAG CGTGGACATT TCTTCATCCA TTTTTCTGCG GAGATCATCA 
ATTTCTTTCT CCAGTGCCCG CTTTTCGCTT TCGGCCTCTT CCAGATGTAG CTGAAGAGGT 
CGAAGTAAAT TTAAAGCTTC ATTGAGACTT TTGTTTAGGG CTCGTTCCGC CTGTCGTTTC 
GATTTGAGCT CCTCTTGCGA CTCCCCGAGC TTGTCGTTCA GCTCGTCAAC TCGTTTCTGA 
GCTTCATCCA GCCGATGCTT GTCTTCTGCA CTCAACGCCT GAGTTTGCGC TTTGGCAAGT 
TCCAAATCGC CTTGTATACC TCGCAATTCC ACTTCCTTTT TTGCTAATTC CCCTTTGAGT 
ACTATCATTT CACTTTCCAG AGCCCTTTGT GCATTCTTCA CCCCTTCACC AACATCCCTA 
GCCGTCGCGG ATGGACCAGG TGATAGATGA TTCTCTGCCG AGCGTAGCCG TCCCTGCAGT 
TCGGTATTTG TAGTTTCAGT CTCGTTATTT TGTTCGTGAA GAGCGCTGAA TTTCGTGCGA 
GCATCGCGTA ACAAATTTTT TAGCTTTTCT TCAGAGGCTC GTTTGGCCTG GAGATCCTGC 
CGGGCTTTGG AAAGCGATTC ACCACCAGCC GGAGTAGAGG GGGATCGATT TGCCGACACG 
AGAACCGTTG CGCCTGCAAG TTTCGACTTG GAAAGCTGAA TCTGCAGAGA TTGAATTTCT 
TGCTTCAGGT CTTCAATCTC GTCATCCTTT TCGTCCATTT GCCTGCGCAT TCTCTTCATT 
TCGTCTTTGT CGATGCCGTT TTTCTTGAGT TGATCGATTT GAAACAGTAA TTGCTGTTTT 
TCCCTGTCCG CTTTTGCAGC AGCATCTTGC AATGGCTTGA GCAAGCCTAC AGCTTCTTTA 
AGACTGGTCC GCAGCTCTAC GTTTCGTTCC TCCCGCGCTT GTAAATCGCC TTTGTACACC 
GACACATGCG ATTCAAGCTC CGACACTCGC TTACGCG 

 

Protein sequence

MFYDTSPSTK VYLPTLSASI AKSTSPADRS PDYASNRSLS KKRKRNTKRY EIRQLFQKAK 
DLERKGHWRK AADVLNEILV WDPADAHSHL ALARLEGRRF PDTNKACEAF GKGTEACPNS 
VHLWQAWAVH EDSSGHVDRA RELFEKALAI DPHNPYVCHA FGLMERKLGN VESAKKLWAL 
ALQKKSTAAL VCQMGELFIA ENQLDQTREL YSKHLLRLET AKDRTEVYLA AAWLEERYFT 
NYIKAEELIK SALALNPSSS VAHVALARLE GRNRQRIRGE GYESATARRL ASACISLETE 
GNTVQPDDGR VFNAWAHIEI KGRRFSSARN ILRRGLSRYP EDYSLLQAAG ILEERVGNYT 
GARAIYGKSL RIQPAAPTLV AYALLDLRHP SSGEANFTRV KALFEEAILL DPRHGPAYNS 
YGNLELRQGN IRTARNIFER GILAHCSDVA SVYHGYARLE LSIGNVKKAR EILVDGIREA 
CQQDAGMDSP HRERALFLSH TLGMLELNSN RPIDALSIFI DGVNRYGNSS QLLLGAALCE 
VKLGNEVNAR MLFERSLLVD EKHPQAWQAW GVMELRAGNT LTAQTLFECG IKAAPKHGAL 
WLAYAISEGR LGNPETARSL FANGIKHSPR HIPLYQAWAS LELREANYNA AKALISEALT 
RDKRNGSGWL VAAEIEKSLG NAGLVNLILR RGIECAPTNA ELYRALGDSL LQRGNVLEAR 
EIFEKGIDVD PLHAPLYHSL AELEARIFNV EGLSKLNARA TKHCG