Gene PHATRDRAFT_47617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_47617 
Symbol 
ID7202667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011682 
Strand
Start bp291603 
End bp292809 
Gene Length1207 bp 
Protein Length372 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002181877 
Protein GI219123117 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.261739 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ACCGAAACAC ACTTCAAGCT TGCTTGACCA TCAAAGAACG CGACAAGCCC CGTCTCGCTC 
CTCTTACTAC TTTCCCAAGT GAAGATTCAT GGCGAGATTA CGAATACCTC CGCATATACT
GACGGCCCTG GGTGCCGCAT CCCCCGCAAT TTACGGATCT TGGTTTGCGT TGAACAAGTG
TGAGGCGTCG GCAAAGACCG ACAGCCGATC AAGGATCGTT TTCTTAGGTA CTGGATCATC
AACAGGATGT CCACGCCCCC TTTGTCCGAT GATTTTTCAG CCCAACCAAT CAAAGAAGCA
AGAAGAGACG ACGGAAACGA AAGCCATGAA AGAAAGGCTG GCTCCCTTTT GCAAGGTATC
CAATCTTGCG ATCGAAGGCG ATCCGAAGAC CAACAAAAAT TATCGAAACA ACCCTTCTCT
TGTGATCGCT TTCGACGATA ACGGGGTACA AAAGCACGTT CTTATTGATT GTGGGAAAAC
CTTTCGGGAG GGAGCCCTCC GATGGTTTCC AACATTGGGA ATCAACAGTT TGGATGCCGT
CGTTTTGACC CACGAACACG CCGACGCCGC CTTTGGCCTG GACGACGTAA GAGGGTTTCA
ACGAACCGAG GGAGGATTCG CCGGAAACAG TCAATTTCGT CAGGTGCCCA TGCCTTTATA
CGTTTCGCAG CAATGTCTAA ACGAAATTGC GGAACGCTTT CCTTGGCTCT TTCCGGAACT
ACAATCCCGT GCCGATATCG CCCTGGTCGA CAAAGCTGTC GTGAAGAGGC ACGTCGCCTC
TCTTGATGTG CACGTCATGG AACCCTTTAA AGCAGTGAAC ATAGAAGGAC TAGAAATTAT
TCCGCTACCA GTTATGCATG GTGAAGACTT GGTTTCTTTC GGATACGCAT TTACCGTTGG
GCAGACGAAC GTCGTTTACT TGTCCGACAT CTCTCGAATG CTGCCGGAAA CATTGGCGTT
CATTAGCAAA AGTCGACCTC CCACAGACAT TCTGGTTGTG GACGCTTTGC ATCCCACGCG
CGACAATCCG GTTCATTTCA GTTTAAATTA TGCCTTGAAT CTAGTGAACG AAATAAAGCC
AAGACGTACG TTTGTAGTGG GGATGAACTG CGATTCTTTC CTACCTCATG ACCAGGCCAA
CAAAGACCTT CGAGACAGTT ACGTCAACAT TCAGCTCGCA TACGACGGGC AAGTAGTCGA
GTGTTAA
 
Protein sequence
MARLRIPPHI LTALGAASPA IYGSWFALNK CEASAKTDSR SRIVFLGTGS STGCPRPLCP 
MIFQPNQSKK QEETTETKAM KERLAPFCKV SNLAIEGDPK TNKNYRNNPS LVIAFDDNGV
QKHVLIDCGK TFREGALRWF PTLGINSLDA VVLTHEHADA AFGLDDVRGF QRTEGGFAGN
SQFRQVPMPL YVSQQCLNEI AERFPWLFPE LQSRADIALV DKAVVKRHVA SLDVHVMEPF
KAVNIEGLEI IPLPVMHGED LVSFGYAFTV GQTNVVYLSD ISRMLPETLA FISKSRPPTD
ILVVDALHPT RDNPVHFSLN YALNLVNEIK PRRTFVVGMN CDSFLPHDQA NKDLRDSYVN
IQLAYDGQVV EC