Gene PHATRDRAFT_47593 details

Gene Information

• Locus tag: PHATRDRAFT_47593
• ID: 7202809
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011682
• Strand: -
• Start bp: 213921
• End bp: 215912
• Gene Length: 1992 bp
• Protein Length: 663 aa
• GC content: 52%
• Product: predicted protein
• Protein accession: XP_002182026
• Protein GI: 219123426

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTGCAAGA AACCGGAGCC GAAACCCCAC GAAAAGGAAG TTTCCTCGTC GGATGATGAC 
GATTCCGTCG CCGAGTCCAG TCCCAAAGAA GACACCAGCT TTCCGGCTGT CGCTCCGACG 
CACTCTGCCA AGGACCGCAA CACCGATTAC GACTGGTTGA TTTTTCTCGG ACCCGCTCTG 
TTTGCCAAGT TCACTCCGGT TTGGACGATT TACGCCATTG CCATCGCTCG CATCGCGACG 
ACGCACCTGA TTCTTTCCCT GCACTATCAG TTCGTCGACA AGGACAACTA TTTCAACAAG 
CTCACGCAGA AACAGTTACG TCGGGAGAAG GATGACTACC TGACCGGATT TTACTTGCAC 
ATGTACACGC AAATCGCTCT GCAGCTGATT TTCCCTTCTA TGTTCTTTAG CCCCAACGAA 
CAGATCTGGA GTTGTGCCAA GGAAGTTTTC CTCTCGCACG TGCTCGTCGT CGAGCCGCTC 
TACTACCTGG CGCATCGCTG GTTGCACGTG CCCAAACAAA TGAAAGCCAT GCATGGCTTT 
CATCATTTGA GTATACACAC CCTACCCTCA ACGTCTTTGG TGCAAAACTT TCACGAGCAC 
TTTGTCTACC TTGCCGTCTT TGGCCCGGCC TTTATGCTGC CTTTTTTGTT ACAGGGGAGG 
CAGCACTGGG CCGTCGTGGG AGCCTACCTC GTTGCCTTTG ACGCCATCAA CGCCTGGGGT 
CACACCAACG TGCAGATTCG TTCCTGGTTC TTGACCAGCC CCTGGTCGCC TTTGACTTAT 
CTCTTTTACA CCCCCGAGTT CCATCTCGGA CACCATGCCT ACTTTAACGC TAACTACGGC 
CTCTTCATGC CCCTGTGGGA TCGCTTGTTG GGAACCTACC GCGAATACCA CAAAAAGCCG 
CGGGCTATGC TGCCGGCCGA TCAACAGGAC TTTGTGTTCA TCGGACACAA CGGAGGATTC 
GGCCACTTTC TGACCATTCC GGAAATTTCC GTATACAACG TCTTTGACCA ATACCTGTTG 
ACCGGACTCC CACTGAAACT CGAGTTTTTC CTCATGCACT TGGTGGCCCA AGTGTGTAGG 
TTGTTCATGA GCTTTTACTA TTGCTCCCGG ACCTGCGTCG CCAATGAGTT CGTGGCGCGC 
ACCATTGTGT TGGTGCGCAC GCCGTGGGAC TACATGTCCG GTCCTAGTCG CTTCGACGCC 
ATCAACCGTG AAATGCTTCA ACTGATGCGG AACGAGCACC AAAAATACGG AACCCGCAAA 
TTCGGTTTCG GGAATCTCAA TAAGATGAAG CAGCTCAATG ACGGCGGCAT GGATTTGACC 
AATATGATTG CACAAGACGA GTACCTTCAC GACAAGAATA TTCGAGTGTG GACGGGCGAT 
ACCATGACGG TCGCTTCCGT TTATAACCAA ATTGTCGAAG TTCCCAACCT GGATCGGCTC 
TTTTATATCG GTGCCGGGGG TAAAGTCGGC ACGGCTGTGT GTGAGCTGCT AACCACCAGT 
CGACCGGGCT TGAAAATATG CATCTTTTCA CGCCACCGTG TTCTGAATCA CCCGAATATT 
TCCTACACCA ACAACCTCAG TGACATGGCC GACTACCGAG TCGTACTGGT GGGAAAAATA 
TTGTCCAACG CTATGTACGA GAAAGCTTTG CGGACGGTAG ATCAGGTCCA AACACGATTC 
ATGCTGGATT ACACCGTTCC GGTACTACCC ATTCCAGCCT TAGAGTCACG AGGAGTCGGA 
ATGATTCGGC ATATTCGCAT CGGTCTGCTT CAAACACGGC CCAACAACGC CTTTCTCAAA 
GGCCACTACG ACTGGTGTAT GAGCCACGGC GAGAATCAGA TTGTCCCGTG TCATTTCGGC 
TGTCTGTTGA ATACGGTAAA TGGTCGGGAG ACCAACGAGG TGGGGGAGAT CAATCCCTTA 
CAGGTCGAAC AACTTTGGAA ACAGGCCAAC GCACGAGGAT TTTACAACAT TCCCATTGAC 
TATCAGACTT AA 

 

Protein sequence

MCKKPEPKPH EKEVSSSDDD DSVAESSPKE DTSFPAVAPT HSAKDRNTDY DWLIFLGPAL 
FAKFTPVWTI YAIAIARIAT THLILSLHYQ FVDKDNYFNK LTQKQLRREK DDYLTGFYLH 
MYTQIALQLI FPSMFFSPNE QIWSCAKEVF LSHVLVVEPL YYLAHRWLHV PKQMKAMHGF 
HHLSIHTLPS TSLVQNFHEH FVYLAVFGPA FMLPFLLQGR QHWAVVGAYL VAFDAINAWG 
HTNVQIRSWF LTSPWSPLTY LFYTPEFHLG HHAYFNANYG LFMPLWDRLL GTYREYHKKP 
RAMLPADQQD FVFIGHNGGF GHFLTIPEIS VYNVFDQYLL TGLPLKLEFF LMHLVAQVCR 
LFMSFYYCSR TCVANEFVAR TIVLVRTPWD YMSGPSRFDA INREMLQLMR NEHQKYGTRK 
FGFGNLNKMK QLNDGGMDLT NMIAQDEYLH DKNIRVWTGD TMTVASVYNQ IVEVPNLDRL 
FYIGAGGKVG TAVCELLTTS RPGLKICIFS RHRVLNHPNI SYTNNLSDMA DYRVVLVGKI 
LSNAMYEKAL RTVDQVQTRF MLDYTVPVLP IPALESRGVG MIRHIRIGLL QTRPNNAFLK 
GHYDWCMSHG ENQIVPCHFG CLLNTVNGRE TNEVGEINPL QVEQLWKQAN ARGFYNIPID 
YQT