Gene PHATRDRAFT_47564 details

Gene Information

• Locus tag: PHATRDRAFT_47564
• ID: 7202793
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011682
• Strand: -
• Start bp: 125342
• End bp: 127579
• Gene Length: 2238 bp
• Protein Length: 682 aa
• GC content: 53%
• Product: predicted protein
• Protein accession: XP_002182004
• Protein GI: 219123381

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

AACAAGTCCA ACTCTGTGGT TTCTTCGGTA TTTGGCGATG ATTCCTCTGC ATTGGTCGCG 
CGCCTTGTGG CTGTTAGTCT TCTCCGGCAC CAGTAGCGCC TTTTACGTTT CGTATGACGA 
GCCAGCGGTA TACCGAGCGG GCGATCGGTA CGTGAGGGTC TCGTCCTTAC TTTGCTTGTT 
ATTGTTGCCC TCGTCGTCGT CGTCGTCACT GCTGCTACTG CAACTGATAC TGCTTCCAAT 
AAGACTCTCA CCCATCTCAT ACGGTCTCTC CTCCTGGTAC TTCTGGACTG CCGCGCTAGA 
GTTCCACTCG TCATGAACAA GCTGAAATCC ACTAAAACCC TATCCTCGAT GGATTACGCA 
CACCGGCCTT GGTGCAACAA CCGGGAGGAC GTCACGCCCC TATCGGCAGA AAGCGCATGG 
AAAGGGAATA TGGATGTTTG GCACGGCGAC GCTTGGTACC GCGGTCCGAT TCTGGGGTTG 
GAGTTTTTGG CAGACCAGTA CTGTGCCGTC CAGTGTGACT TTTCTTTGGA ACAACCTTCC 
GAGCAGGAGG AGTGGGAGTC GGCCATTGCC CGGGGATTCC ACTACCATGT GAGCGTGGAC 
GGGTTACCCG TTGCTCATCA GTGGGAAGAT GATGACACGG TACATGTGCT CTCTTCGGGC 
GGGGTACCAC TAGGACGTCG TGGAGGCCCC GGTGAGTCTG CCAATCCGCA ATTCGACAAC 
GAGACCGTGG AGAACCTCTT TGTCTACAAT CACTGGAATT TGAGAATCGA CTACGTGGAA 
AAGGGGCCGG GCGAGTACCA GATTGTGCAC GCCGTGATAC AGCCCTTCAG CGTCCAACCA 
GTCGATGGTA CGGACGGAGC GCGGCCGGCC ATGGAATCAT GCACAACCGA ACGGCGGCAC 
ACAAATTACG ATATGACGAC AACTATTCCA CCGCAGTCTC CGAGTGGATC GTTTCCGTTT 
ACCGTGGACG TCATTTGGGT AAAGGCGCCG ACCGACATAA GAGCTTCCTC CCGGTGGAAC 
CAGTTGTTGA CGATGGACGA CTTCGATCCG CTTATGCACG ACGTCTCTCT GCAAATTGCT 
TGTCTCGTAC TGGCCCTTTT CATTAACGCC ATCTTGTACG GTTCCCTATG GACCTGGGTG 
ATGCGGGACT TGAGTTACAA ACCCGTCGCG ATGGAAACGG AAATAATCTC TGAAGAGCAA 
GAGCAAGAAA TGCAACTCTG GCCGCTTTCG ACCCGTGTAT TTTTCCCGGT CACTCGGCAC 
CCGTGGCTCT TTTGTGCCGC CTGTGGACAA GGAGCCCACT TATTGTTGAC AACCTTGTGT 
TTTCTCTTCT TTTTCCAAAT TGGTGTCATT CACCAAGCAC TCGGGGCCAC TATCTTATTA 
CCCGTCGTTG CGCTGTATAC GATCGCCAGT CCGATGGGCG GTTACGTAAC GGGTCGTTGC 
CGAAGAGTCC TACACGGGAG AATGATGCAA GCCTTGAAGG CATGCGTTTC AGCTTCCACG 
CTGTACCCAC TTCTGGGACT ACTCGTTATG GTTTTGTGCT ACGACGTCTT TCCCAGTGAC 
GAGGCTCCCC GGTACCGCGT GCTGGATTCC AGCAAGGAAT TGATTCTTTT GTGGTTACTC 
GGCATTGTTC CGTTGACACT CCTCGGTGGG TTTTTGGGAT ACCGCAACGG ACCGATTGAT 
AAATTTCCAG TTTCGGAAGG AACGATGGGC TATCAGGATC TTGCTTTACA CAGAGTGGAT 
GATAGTGATG ATTCCTCCAA GCGCTCTCTA TGCTGGCTTA GGATGAGGAC ACCTGTTCTG 
TTCTTGACGG CCGGTCTTCT TCCCATGCTG AGCTTTTTCA ACACCTATGC GTATGGTGTA 
GCTGCGCCGG TGTACCAGGA CTTTTACGTG TCCAGCCGAC TTCAAGTTTT TCTACCATTT 
ATTTTGTTCT TGACGTGCGT CGGGGGCGTG GCTATGCTAC TGTTCTACCG GCAAATTCGA 
GCACAAAATT ATGCGTGGTG GTGGGCTACA TTCTTAACTG CCGGTTCGAG TGGTTTCTAC 
TGTTTTTTGT TATCAATCAG TTGGCTCATC TACAACGCCA CCCATCGGAA TGCCGACGCC 
CGGTCCGTGG CGGTCTACAT GCTCTGGTTC GCCTACACCT CGCTGGGTGT GACGCTGGCG 
TGTGGTTTTG TGGGTATCCT TAGTTGCGTT TTGTTCAGTC GAGCGTTGTA CTCCTACGGA 
CTGTGCCGAG CCCCTTGA 

 

Protein sequence

MIPLHWSRAL WLLVFSGTSS AFYVSYDEPA VYRAGDRVPL VMNKLKSTKT LSSMDYAHRP 
WCNNREDVTP LSAESAWKGN MDVWHGDAWY RGPILGLEFL ADQYCAVQCD FSLEQPSEQE 
EWESAIARGF HYHVSVDGLP VAHQWEDDDT VHVLSSGGVP LGRRGGPGES ANPQFDNETV 
ENLFVYNHWN LRIDYVEKGP GEYQIVHAVI QPFSVQPVDG TDGARPAMES CTTERRHTNY 
DMTTTIPPQS PSGSFPFTVD VIWVKAPTDI RASSRWNQLL TMDDFDPLMH DVSLQIACLV 
LALFINAILY GSLWTWVMRD LSYKPVAMET EIISEEQEQE MQLWPLSTRV FFPVTRHPWL 
FCAACGQGAH LLLTTLCFLF FFQIGVIHQA LGATILLPVV ALYTIASPMG GYVTGRCRRV 
LHGRMMQALK ACVSASTLYP LLGLLVMVLC YDVFPSDEAP RYRVLDSSKE LILLWLLGIV 
PLTLLGGFLG YRNGPIDKFP VSEGTMGYQD LALHRVDDSD DSSKRSLCWL RMRTPVLFLT 
AGLLPMLSFF NTYAYGVAAP VYQDFYVSSR LQVFLPFILF LTCVGGVAML LFYRQIRAQN 
YAWWWATFLT AGSSGFYCFL LSISWLIYNA THRNADARSV AVYMLWFAYT SLGVTLACGF 
VGILSCVLFS RALYSYGLCR AP