| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_37960 |
|---|
| Symbol | |
|---|
| ID | 7202877 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011682 |
|---|
| Strand | - |
|---|
| Start bp | 515437 |
|---|
| End bp | 516975 |
|---|
| Gene Length | 1539 bp |
|---|
| Protein Length | 512 aa |
|---|
| Translation table | |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002182082 |
|---|
| Protein GI | 219123543 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGAAG CCTCAACTAT TCACAATCCG GATTTATTTC AAAACTTTAT GTCCACAAAA
GGAACATACT ATCTTAATGG ACTCGCATCA TGCCAGGTTG GCGACCGCAT AATGCATCCC
TTTGAAGCAC ATGGACACTG CAAATCGATG GTCTTCGACG GTCAAGGCTC CCTACATCTT
ACATCTCATC TGATCGAAAC ACCTCTGACA CAAAAAGAAA TTCAAACAAA TCAACCCGTT
GCCCGGGGCG TCATGTCGAC TCTTGCTGAT CCTACCACCC TTTGGGGTAT GCTGCAGAAT
GCCTTATCCC CGACCGAGCG CGACACGGCC AATTTGGTTG CATCACTTTG GCCACCTCCG
AGTGAAGCCA CCGGTATCAC CACAAATCCG CTGTTGATAA CATGTACAGA CAATGGCGAG
CCCTACGTAC TGGACCCCAA AACGCTCAAA ACAAAGGGGA AACTGACAGA AGTTGTACCA
AAGCTAGGAT CCATTTTGGA CGGGAAAAAG TGTTTGGCAC ACACAAGGTA CGATCCCGTT
CGCAAACATT GGATCCTTTG CGTAAACGAA ATGGATATAC CTGGCGAAAA CTACATGGGC
AACTCGACCA TGATATTCTA CGAGCTGGAC ATCAATTTTG ATGTTGTATC TTCTCGATCG
TATACAACTC GATTCATGGT CTTTCATGAT TGGGTGATTA CCGAAAACTA CTACGTTGTG
CCGCAGAATC CGGCTCGAAT TAAATGGGCA GAACTTGGCA AGTTTCTGCT GGGTGCCACG
GTTGGGACAG ATATTTTCGG AATGGAAGAA GCCACCAATG GGGCATTTCT GCTCATTCCA
CGACACGATC CCAACCAACC GGTCCGAGTT GTGGAAACGG ACGCCTTTTT CAATCTCTTT
CACTTTGGCC CCTGCTTCGA AAAGGACAAT GCGATAGTAT TGCACGGTTC TGTGTTTGAC
CGATACGAAT TTGGCGGGGA AATGGGCTTT GATGGTCCCA CTCAAACGTT TGATCCTATT
GCCTGGGGCT CATCCGGTGG TAAGGCTCCA CCACCCCGAC TGGACAAATT TGTCATCGAC
AGTACAACGT TCGAGCTGAC CGCAAAGACA CGGATTCCAA TTGTAGACCC CTTCTCGGGT
CAAGACATTC CGGTTGATAT GCCAACTTTT CGTGGGGACG CCATTGAATG TCGGTACGCT
TACTTTCTAG GCGCTTGCCG TCCAGAGGGT TGGTTTCCCT TCCGATCCAT TGTCAAGTTG
GACTTGGAAA CGTACGAGAC ACACAATTGG GATGCCGGCG AGGAACAGGT CGTGAGCGAA
CCCATGTGGG TGCCGAAATC ATCGGAAGAA AACAAGCTTG ACGAAGGCTT TGTGCTGAGT
GTCGTACACG ATGCCGAAAC AAAATCCTGT CGATTGAACG TTTGGGACGC GGTGACGTTT
GATCAAGGTC CGATTGCGTC CGTACCTTTG GGAGCCTTGA CACCCTGGTG CGTCCACGGC
AGCTGGACGC CCGAGTACAA TCCAGGAAAG ATCAGTTGA
|
|---|
| Protein sequence | MAEASTIHNP DLFQNFMSTK GTYYLNGLAS CQVGDRIMHP FEAHGHCKSM VFDGQGSLHL
TSHLIETPLT QKEIQTNQPV ARGVMSTLAD PTTLWGMLQN ALSPTERDTA NLVASLWPPP
SEATGITTNP LLITCTDNGE PYVLDPKTLK TKGKLTEVVP KLGSILDGKK CLAHTRYDPV
RKHWILCVNE MDIPGENYMG NSTMIFYELD INFDVVSSRS YTTRFMVFHD WVITENYYVV
PQNPARIKWA ELGKFLLGAT VGTDIFGMEE ATNGAFLLIP RHDPNQPVRV VETDAFFNLF
HFGPCFEKDN AIVLHGSVFD RYEFGGEMGF DGPTQTFDPI AWGSSGGKAP PPRLDKFVID
STTFELTAKT RIPIVDPFSG QDIPVDMPTF RGDAIECRYA YFLGACRPEG WFPFRSIVKL
DLETYETHNW DAGEEQVVSE PMWVPKSSEE NKLDEGFVLS VVHDAETKSC RLNVWDAVTF
DQGPIASVPL GALTPWCVHG SWTPEYNPGK IS
|
|---|
| |