Gene PHATRDRAFT_37793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_37793 
Symbol 
ID7202785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011682 
Strand
Start bp87776 
End bp88717 
Gene Length942 bp 
Protein Length313 aa 
Translation table 
GC content54% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002181996 
Protein GI219123364 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTTCTC GTCTGATTGA CAAGGTTGTT CCCGCCACGT CTAGCGGCGG CCCCGTGTCG 
CGCTTGATCG GAAGCGTAGA TATAGACGGC AAGGGCACGA GTCACGCACT GCCCGAAGTC
GATCCATTCA TCTTGCTCGA TCTCGCCCAA TTGAACCAGC ACAACCGTCC GCCGTTTGGT
GCACATCCGC ATCGGGGCCA TTCTGTGGTC ACGTTATTGT TACAAGGCCA AATGCAATCC
TGGGATTCTT TCTCGAACCA ACACACCACG ATTAAAGGTC CAGCATCCTA CTGGGTTGAC
GCCGGTACCG GGGTTTTCCA TGACGAAACC AGCGTGATTG CGGACGAATC AGATCCAGCT
CAGCATATCA AATTGCTTCA ACTCTGGGTT GGTGTCAAGG AAGCCGATCG CCAGAAACCG
GCCAGGCTGC AGTACGACAC GGATCTTCCC ACGACGGATT TACTGGACTG TGAGACGAGC
CGAAAGGCCG GGACGGTCAC TCATTACGTC GGAGAAAAGA CTACGATCGA AACGCCACAT
CCCCTGGTCG TATTTCATGT GCAGCAAAAC GCCAACACGA GTGTAGACCT GTCCATAGAC
CCCTCCCACG GAGGCTTTAT CGTGATGCTC AGTGCCGACG ACGCTGCCGC GACAGTACAG
TTTGGGGGGA CGACTTCGCC GCTCAAACAG CATGACGTAT TAGTCTTGGC AAACGACGTA
TCAACATCGA GTACTGTGAA GGCAACGACT GGTGATCATT CTGCCGAGTA CATGGTTTGT
GCAGGAGCAA AGCACGGCGA GGCCTGGGTC AAAAAATTAG TAGCGAACGG TGCCATTATT
TGCGCTACCA CCGAACAAGC TCAGGATGTG GCCCCAAAGG TCGAGGCCTA CGCTGCAGCC
GGAAAGGTAG AAGGTGGCAG TTTTGCACCT TTCGGATCTT AA
 
Protein sequence
MTSRLIDKVV PATSSGGPVS RLIGSVDIDG KGTSHALPEV DPFILLDLAQ LNQHNRPPFG 
AHPHRGHSVV TLLLQGQMQS WDSFSNQHTT IKGPASYWVD AGTGVFHDET SVIADESDPA
QHIKLLQLWV GVKEADRQKP ARLQYDTDLP TTDLLDCETS RKAGTVTHYV GEKTTIETPH
PLVVFHVQQN ANTSVDLSID PSHGGFIVML SADDAAATVQ FGGTTSPLKQ HDVLVLANDV
STSSTVKATT GDHSAEYMVC AGAKHGEAWV KKLVANGAII CATTEQAQDV APKVEAYAAA
GKVEGGSFAP FGS