Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_28979 |
Symbol | |
ID | 7202704 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011682 |
Strand | - |
Start bp | 556355 |
End bp | 556988 |
Gene Length | 634 bp |
Protein Length | 164 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002182088 |
Protein GI | 219123555 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.865552 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTAGGGTCGT CGTCGTCTGT TACCACACTG GTTTATCAAA TACAGTACAT CGTCTGTAAA CACCATGGGC CCTCCTCCGA GTGATGATGT TAAGATCGTG ATCATGCGTA CCGTTGGTGG TGAGATTGGT TCTGCCTCCT CCCTTGCCCC CAAGATCGGT CCTCTTGGTT TGTCCCCCAA GAAAGTTGGC GAGGATATTC AGAAGGCCAC CATGGACTGG AAGGGTCTTA ACGTTACCGT CAAGTTGACT GTAGTGAACC GTCAGGCGAC TGTCAGTATG ATTCCTTCCA GCTCGTCTCT CGTTATGAAG GCCTTAAACG AGCCCGTTCG TGACCGCAAG AAGGTCAAGA ATGTCAAACA TGACGGCAAC TTGACGCTTG ACCAGATCAT TGATATTGCT CGTCAGATGC GCGAACGTTC CATGGCTCGT AAGCTGAAGG GAACTGTAAA AGAGATTCTC GGAACCGCCA ACTCGATCGG ATGCTCGGTC AACGGCGAAT CGCCGCGCGA TATTCAGGCA AGCATTGATG ATGGTGAGAT CGAGATCCCG GAAGAATAAG CACTCTTGGA AGGCCTCCAA AACATGAAAT CCTTTTTATA CCTAACTGTC TAAAATAGAT TCTTTTGTGA TGCT
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Protein sequence | MGPPPSDDVK IVIMRTVGGE IGSASSLAPK IGPLGLSPKK VGEDIQKATM DWKGLNVTVK LTVVNRQATV SMIPSSSSLV MKALNEPVRD RKKVKNVKHD GNLTLDQIID IARQMRERSM ARKLKGTVKE ILGTANSIGC SVNGESPRDI QASIDDGEIE IPEE
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