Gene PHATRDRAFT_28979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_28979 
Symbol 
ID7202704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011682 
Strand
Start bp556355 
End bp556988 
Gene Length634 bp 
Protein Length164 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182088 
Protein GI219123555 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.865552 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTAGGGTCGT CGTCGTCTGT TACCACACTG GTTTATCAAA TACAGTACAT CGTCTGTAAA 
CACCATGGGC CCTCCTCCGA GTGATGATGT TAAGATCGTG ATCATGCGTA CCGTTGGTGG
TGAGATTGGT TCTGCCTCCT CCCTTGCCCC CAAGATCGGT CCTCTTGGTT TGTCCCCCAA
GAAAGTTGGC GAGGATATTC AGAAGGCCAC CATGGACTGG AAGGGTCTTA ACGTTACCGT
CAAGTTGACT GTAGTGAACC GTCAGGCGAC TGTCAGTATG ATTCCTTCCA GCTCGTCTCT
CGTTATGAAG GCCTTAAACG AGCCCGTTCG TGACCGCAAG AAGGTCAAGA ATGTCAAACA
TGACGGCAAC TTGACGCTTG ACCAGATCAT TGATATTGCT CGTCAGATGC GCGAACGTTC
CATGGCTCGT AAGCTGAAGG GAACTGTAAA AGAGATTCTC GGAACCGCCA ACTCGATCGG
ATGCTCGGTC AACGGCGAAT CGCCGCGCGA TATTCAGGCA AGCATTGATG ATGGTGAGAT
CGAGATCCCG GAAGAATAAG CACTCTTGGA AGGCCTCCAA AACATGAAAT CCTTTTTATA
CCTAACTGTC TAAAATAGAT TCTTTTGTGA TGCT
 
Protein sequence
MGPPPSDDVK IVIMRTVGGE IGSASSLAPK IGPLGLSPKK VGEDIQKATM DWKGLNVTVK 
LTVVNRQATV SMIPSSSSLV MKALNEPVRD RKKVKNVKHD GNLTLDQIID IARQMRERSM
ARKLKGTVKE ILGTANSIGC SVNGESPRDI QASIDDGEIE IPEE