| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_47334 |
|---|
| Symbol | |
|---|
| ID | 7202395 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011681 |
|---|
| Strand | - |
|---|
| Start bp | 320784 |
|---|
| End bp | 321901 |
|---|
| Gene Length | 1118 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | |
|---|
| GC content | 48% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002181700 |
|---|
| Protein GI | 219122744 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.51359 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACGGTAG TTGGTATCAT ATTTTGCGTA AACTGTAAAG CCCCTTTGCT TGTGATTCTG
TGAATATGTC GACGCCTTCG TCAAACCCTG CAGGTGTTGC TGCTCCCGTT ACGAAAGTCA
CATCGAATGA AGAAGATTTA CGGGCCGAAC TTCGGTCCGT CATGCTCAAA TTACGGAAAC
GTGAACCGTT AGATCCAACT TATAAGAGAC TATTGATGAA TGGCGTTGTG ACACCACGCC
GCCCGGTTCT CCCTAAAGGA CGCATCTACA AACGCGTTGG AACCCGCCTC CGAGAACGCG
TCGAAAATTA TATCGAACAA AATCGAGGTA AGGACCTCTA TGATCGAATT TCTCAGCGTC
AGCCATTGGA AGAGGATAAA ATGCGTGCTG CGTTGACTCT TCGAGAGGCC AAAGATCATG
AGCAACAGGC GCTTTTGGAA GCCACTCTGT CCTCGTTGCC TCGACGAAAT GGTATGGATG
AAATGAGTCG TCGACGGCAC ATGGAAGGAA TTGCTATGGG CTTGCAGAAT CGCGAGAAAG
TCCCTCCGAG AGCATTCACC CCTGTTCCCA CTACTGCTGC CGAGCAAATA GAAGCAGCTC
GACAGCAAGC TGAGCTGGAA CAAAAGCGCG AGCAAGCGCG CGCGCAAGAA GAAACACGTC
GCAAGCGAGA GGATGACGAT CGTCGTCAAA GAGAAGAAGA GATCGAGCAA CGTCGAAATA
CTGTTGAGAC TCCTCAACAA GCACTACGGA GAATCTACTA CCCTATCTTC AAAAAGCTTT
GGGATATGGA TTTCCCTCAT TTGGGAGGTA TCAATCCTTT TCGAATTGTT ATCGATCGAG
AAAACTGTGC TTCGGTTGGC GCTCCTGACT ATTTCGATGT TATTGAGACA CCAATGAATC
TGTCGTACAT TCAACAAAAG GTAGACAGTC TGACATACGA AAATCTTGGA GGCTTCTTTT
CGGACGTGGA ACTTATGCTG AAAAACGCCT TGAAATACAA CAGTGATCCC AGTAACCCTT
ATCGTATTGC TGCCGAAGAA ATGCGGAAGA GGTATCTGAA AATGGCAAAG AAGGTAATGG
CCGTCCTGAA ACAGAACCAG CGCCGTCAGC CGAGCTAG
|
|---|
| Protein sequence | MSTPSSNPAG VAAPVTKVTS NEEDLRAELR SVMLKLRKRE PLDPTYKRLL MNGVVTPRRP
VLPKGRIYKR VGTRLRERVE NYIEQNRGKD LYDRISQRQP LEEDKMRAAL TLREAKDHEQ
QALLEATLSS LPRRNGMDEM SRRRHMEGIA MGLQNREKVP PRAFTPVPTT AAEQIEAARQ
QAELEQKREQ ARAQEETRRK REDDDRRQRE EEIEQRRNTV ETPQQALRRI YYPIFKKLWD
MDFPHLGGIN PFRIVIDREN CASVGAPDYF DVIETPMNLS YIQQKVDSLT YENLGGFFSD
VELMLKNALK YNSDPSNPYR IAAEEMRKRY LKMAKKVMAV LKQNQRRQPS
|
|---|
| |