| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_47247 |
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| Symbol | |
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| ID | 7202300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011681 |
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| Strand | + |
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| Start bp | 59062 |
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| End bp | 60699 |
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| Gene Length | 1638 bp |
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| Protein Length | 467 aa |
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| Translation table | |
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| GC content | 47% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002181476 |
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| Protein GI | 219122280 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000828474 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GCGAAGTCAG ACAACCTCCG GGATGAACTT CAAATACTAA CTGTAACAAG GGATACTCCA
CTGCCTTTTT GCGAAACGAA GACATACCAT GCAACCATGA ACCACTAGAA AGCCAGCCTC
TTGTGAACTC TGATAGTCAA AGTCATTGAA AATAGCGCAA GGGCGTAATA TGGGCGAGCT
TGTGGCTCGG CCCCCCATTC ATACGGCGTC GTATGATCGC CTGCAGCCAG ACCGTCTATC
CACAATTCTG CTTTTCCACG AAGACGATCC CGTCAACTAT CGCTATAAAG TTGTAGTCGT
GGACCGAATG CTGCTTCCCT CCACCCCCCT TCAATACGGG ACTGCCGCAT TTCTCATTCC
AGCTGGACGG GAAGCTGAAT ACATCTTTGC TTCGGAGATT GGATTAAAAT CAATAGCGGA
ATCTGCCAGC ACGGCCCGAC TGATCGCAAT CAGTTTTGGA AGACATCATA GGTTCGGCTC
GCAGATAATC GTTCAGGAAG AACTGTCGTT CGTCGTACAG GTTCTCTCTC GCCAAGGCAC
CTTTCTACCG AAACCACACC AGGAGCTGCT TGCCGAGGTT GAAATCCCAT TCATGGCTGT
AGATGGGATT GGAAATCGCC ATATTGTTGC AGAAGGAGAG AGTCAAATTT CAGGCAAGTA
TCTTGTTGAG CAAGTCGATG TTGATGGAAT GCAGGTCCGT CGACTATATT TTGCGAACAA
TCCTTTTGTA ATTCAGTCAG AAGCTGTGCT GCGCGATCAG GGTCGGGTTG ATAAGAGCTG
TTCTGCGTTT GACTATCACA AAACTATGGC TGCCGGTATT CTGGCACTGG TTGATTCGGA
TGTTTTGACG CACGGTCTTC TGGTTGGTCT GGGGGGTGGT TGTTTCGTCA ACTTGATTGG
GCATCTCCTG AATGATCTTG AATTGTCGGT AGTCGAACTT GACCCTGCTA TACTGAAAAT
TGCCGAAGAG CACTTTGATC TAGATCTGGA GAGCAACCGC TTGGACATCC GGGTGGGCGA
CGGCCTAGAG ATCATGCCAC TTACCCATGA CGCCGTTTCG GGTTGTCCGA CAACCTTCGC
AAAAGAAAGT ATGGCATTTG TTGCCATTGA TGTTGATTCG AAGGACCAAT CAGCTGGTAT
GTCATGTCCG CCAGAATCTT TCGTAGAAAT TGAGTATTTG TCGAGGTTGG CTGAGCTTAT
CCACCCACAT GGAGTTCTAG TCATGAATAT ATCTGCTCGA GATCCTGAAA AGCTAGATCA
TGTTTGTCGA AGAGTGCAAC AAGTTTTTCG AAACGTTGCG CTGGCAGCAC CTCACGACGG
AGAGGGCAAT GGGAAAAAGA AAGATATAAA TATGGTTCTA TTTGGGAAGC ACGCCGTCAT
GGAAGTGTCA ACATCAAAGC TTTGTCCACT GGTGGAACCT CATACTACCT ATGAATCAGG
GCCTGACCTA AAGAGGGCAT TGGCAAATCT TGTTGCATGG AACGAAACAA AATCAATTGA
CACTGGTTCA TCAAACAAGA TTGGGCGAAC CAAGACCACT CGACAGAAGA AAAAGCGTGG
AAAGAGAAAA TAAAACTGCG CTGAATCCAC CAAGAAGTCG AGTTTGGCCG CAAACAAAAT
AGCGCAAAAT TATTTTAT
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| Protein sequence | MGELVARPPI HTASYDRLQP DRLSTILLFH EDDPVNYRYK VVVVDRMLLP STPLQYGTAA
FLIPAGREAE YIFASEIGLK SIAESASTAR LIAISFGRHH RFGSQIIVQE ELSFVVQVLS
RQGTFLPKPH QELLAEVEIP FMAVDGIGNR HIVAEGESQI SGKYLVEQVD VDGMQVRRLY
FANNPFVIQS EAVLRDQGRV DKSCSAFDYH KTMAAGILAL VDSDVLTHGL LVGLGGGCFV
NLIGHLLNDL ELSVVELDPA ILKIAEEHFD LDLESNRLDI RVGDGLEIMP LTHDAVSGCP
TTFAKESMAF VAIDVDSKDQ SAGMSCPPES FVEIEYLSRL AELIHPHGVL VMNISARDPE
KLDHVCRRVQ QVFRNVALAA PHDGEGNGKK KDINMVLFGK HAVMEVSTSK LCPLVEPHTT
YESGPDLKRA LANLVAWNET KSIDTGSSNK IGRTKTTRQK KKRGKRK
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