| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_47245 |
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| Symbol | |
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| ID | 7202336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011681 |
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| Strand | + |
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| Start bp | 16140 |
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| End bp | 17836 |
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| Gene Length | 1697 bp |
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| Protein Length | 480 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002181470 |
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| Protein GI | 219122268 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.548849 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TCGTCAAACG CTTTTCCAAG CTGTGCTCGC AGTCTAATCA TGGGATTCGA AGCCTTCTTA
TAAACTTGAA GCGGATTTCT GAGCCGCAAA GGTAGAGCAA GTAAATAAGT ACCTCCACCC
GACCTTGCTT TAAGTGCACC GCTATTTCCA AGCCTTAAGC TTTACTTCAC ACCTCGATCG
AGCTTGCGGT GGGATGCCGT CACGAAGTGT TATTGAAGTC GATGTTTTAA TTCCGGTTCA
CAACGCGAAG GATACACTGC GGGCTACGAT CGAGTCCGCC ATGAATCAAG AACCATCACA
CGATGACGAC AACGTTGAAA ACCAAATCGA CCTCGATGTT CACATTTGCT GCTATGATGA
CGGTTCTACA GATACGAGCT GGTCCATACT CAAAGATCTG GAAGATCAGC ACATGAAAAA
TTGTCGGCAA TGCTCCTCCA TCCGTTGCGA CGGCAGCAAG CGCTCGCGAG TGCTGACGAA
ACTGTGGTTA GGTAAGGAAG CAACATCTCG AGGAGCAGGT TACGCGAGAA ACCGGGCGGC
TCAACTTCGA CCAAATCCAA ATCCCGATGG TTTTCTTTGC TGGTTGGATT CAGACGACTT
GATGGCACCG ACACGGATAT ATCGCCAAGT GCAGTATTTA CTCTCTCTAG AGGAGGAAGC
TCGCAAACGA GCACTCTTGG GATGCACATT TGAACGCGAC CCACCCGATT CAACATGGCA
CTATTCTGCT TGGGCCAACG GTTTGACCGA TGATCGGCTA AGTCTGGAGC GGTTCCGAGA
ATTGACCATA ATTCAGCCTT CATGGATGAT GCAGCGATCC CGATTTGCGG AAGTGGGCGG
CTATGTTGAA GCCCCTCCCC TAAACGACAG TGATGATTCC GTTGAATGTT CCGTATCTAT
CCAGAAATTC GAACTAATAC ATCCAGTATT TGACACCCCC ACGACGCTGC GATTAGCGGA
AGATTTGCGG TTTTTTCATG CTCATCTACA CTCGAATGGA ACCCTCAATC TATTGCGTCA
TGATTCTCCC CTGGTGATAT ACAGGCATCG TGCCGGTCTT TCTCAAAGCA CGACAACACC
ACGGAAACTA TTGCTTCAGT TACGAACGCT AGCGTTTGAA CGAATGGTTC TTGAATCGGG
GGAAATATGG AAAGAGAACG GTTTCTGTAT CTGGGGTGCG GGCCGAGATG GAAAGGATTT
TGTTAAGGCT CTGTCGGATA CGAACCGTAA AAGAATTCGT TGCATGGTCG ACGTAGATGA
CAGGAAGATT GCTATTGGCT CTTACGTTAA TCGAGATATC AGAGTCAACA TTCCTATTAT
GCACTTTTCT CTTTTGGCAA AGGACGAAAG CTTGCGTAGC AGCCTCTACG AGCAATGGAC
AACGGGACAG AACCATAACC TTCCCGGATT TGGTAAGATT CGGAAGGGAA GAAATTTGAC
AGGCCCGCAA GGGCTCCCTT CAGCAAAGAA ACCCAAGTTG TCGAACAAGG GTAGCGTTGA
CCCGCAATTC AAATCCCTCC TACGCGAGCT GCCCGTTGTA GTTTGTGTCT CCATGTATCG
GACAAATGGT GCATTGGAGC ACAACGTGAA GCAAATTGGA CGCATCGAGG GTGAAGATCT
ATGGCATTTT ATCTAATAGT AAGACGGCTG GCTACTTTCG AGGAAATAGT AAACAGGCCT
CAGAGGTTTT TGTTGGT
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| Protein sequence | MPSRSVIEVD VLIPVHNAKD TLRATIESAM NQEPSHDDDN VENQIDLDVH ICCYDDGSTD
TSWSILKDLE DQHMKNCRQC SSIRCDGSKR SRVLTKLWLG KEATSRGAGY ARNRAAQLRP
NPNPDGFLCW LDSDDLMAPT RIYRQVQYLL SLEEEARKRA LLGCTFERDP PDSTWHYSAW
ANGLTDDRLS LERFRELTII QPSWMMQRSR FAEVGGYVEA PPLNDSDDSV ECSVSIQKFE
LIHPVFDTPT TLRLAEDLRF FHAHLHSNGT LNLLRHDSPL VIYRHRAGLS QSTTTPRKLL
LQLRTLAFER MVLESGEIWK ENGFCIWGAG RDGKDFVKAL SDTNRKRIRC MVDVDDRKIA
IGSYVNRDIR VNIPIMHFSL LAKDESLRSS LYEQWTTGQN HNLPGFGKIR KGRNLTGPQG
LPSAKKPKLS NKGSVDPQFK SLLRELPVVV CVSMYRTNGA LEHNVKQIGR IEGEDLWHFI
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