Gene PHATRDRAFT_13987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_13987 
Symbol 
ID7202572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011681 
Strand
Start bp654592 
End bp655635 
Gene Length1044 bp 
Protein Length347 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002181777 
Protein GI219122905 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTCCG AATATTGCAT AAACTTTTCG GATGTCAAAG CCGCGTACAA GAACACATCG 
GACACGGCAC ACCGCACCCC GGTTTTGACG TCGTCCTCAA TTGACAGAAT GATTGGTCGC
AGGTGCTTTT TCAAAGTGGA AGCGATGCAA AGAACCGGCT CATTTAAATT TAGGGGAGCC
TTGAATGCGA TTCGCAGTGC AATCGCTGAT CAAGCGGAGA AGCCGGCGAT GTTTCAGGTT
GTCACCCATT CGTCAGGAAA CCATGCGCAA GCATTGGCAC TAGCTGCCAA GCTGGCCTCC
AGCGAAAACT GCACAGTAAC CGCGACAATA GCCATGCCTA AGAATGCCCC TATGGTGAAG
AAGCGTGCCG TCACAGATTT TGGTGGAATC ATCGTTGAAA CCGAGAATAA CAATGAAGCC
CGCGATGCCG TTGCGGCAAG GATCCAAACG GAAACTGGTG CCACTTTCGT TCATCCGAGT
GAGAATCCGA AAGTCATTGC GGGACAGGGA ACAATTAGTA TTGAGCTCGT GGAGCAGATG
AAAGAAATCC AGGAACATTT GCAAGTAATC ATTATTCCTG TGGGAGGTGG CGGCTTAGCA
TCAGGGAACT GCATTGCACT TCGCGCTTTA CTGGGCGATG ATATCAAAAT CGTTTTGGCA
GAACCAGCAG CTCTAGACGA CGCAAAACGC TCATTTGAGG CCAGGCATCT TCTTAGTCAT
TCTCCCGACA ATAAATTGCA AAGTGTCGCT GATGGCTTGA AAACAACTTT GGGTCCGAAC
ACTTGGCCAA TTGTTCGAGA TCTTGTCGAT GACATATTCA CTGTCTCGGA AAAAGAAATT
TTATACGCGA CAAAGCTTAT TTGGGAACGC CTCAAGATAT GCATTGAACC AAGCGCTGGC
GTTGGGGTGG CAGTGGCTAT GTCGAATTCA TTTCAAATGA AGTATACTGC CGAGGCTGGC
TTTTCTAACG TTGGTATTAT TCTTTGTGGA GGCAATGTGG ACATTCTAGA AGTTACTTCT
AAAATGGAGC TCGTCGGACT CTAA
 
Protein sequence
MSSEYCINFS DVKAAYKNTS DTAHRTPVLT SSSIDRMIGR RCFFKVEAMQ RTGSFKFRGA 
LNAIRSAIAD QAEKPAMFQV VTHSSGNHAQ ALALAAKLAS SENCTVTATI AMPKNAPMVK
KRAVTDFGGI IVETENNNEA RDAVAARIQT ETGATFVHPS ENPKVIAGQG TISIELVEQM
KEIQEHLQVI IIPVGGGGLA SGNCIALRAL LGDDIKIVLA EPAALDDAKR SFEARHLLSH
SPDNKLQSVA DGLKTTLGPN TWPIVRDLVD DIFTVSEKEI LYATKLIWER LKICIEPSAG
VGVAVAMSNS FQMKYTAEAG FSNVGIILCG GNVDILEVTS KMELVGL