Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_47078 |
Symbol | |
ID | 7202161 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011680 |
Strand | + |
Start bp | 346190 |
End bp | 347102 |
Gene Length | 913 bp |
Protein Length | 234 aa |
Translation table | |
GC content | 47% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002181189 |
Protein GI | 219121679 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.410714 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TGCTTTGACT GTGAGTCCAC CGGATACAGT CTCGAGTTTT TAAAAAGGCT TTACGGTTAC ATTATTTTTT ATTCACCCCA GATAATTATT CATTTGCTCT CAGGGTTTTC GTGGCCATGG CGTCGTCACC GGCTCCGCAA AACACTTTCC GACATGTTTT GCCGCCGGAC CATCTTGGAA CAAGACACAT TTCCCATCAA GCCTTTTGTT TGGCAGTAAA CTACACATCC TCCCGAGAGA AAGAGTACTC TCTAGTGGTG GTCACCGACT CGGAGAAGCA ACGTATACTG TTAGGTGAAA AGCATCGAGG GTTTGGTACT GGGATGTACA ACTCATTCGG GGGTAAACTT GAGCGAGAGG AGTCTGCCAC GGCTTCCGCT TGTCGCGAAC TCGAAGAAGA AACGGGCATT GTGTCGCCGC TATCGATTAT GGAGGAATCA CATGTTGGAA CGCTGCGGTT TACTTTTGAA GATTCTGAGA CCGAAATGGT AGTGCATTTG TTTCGAGTGA ATGTTACAAT ATCTGCTTCG GGCAACGATA AAAGTGGTGG GCCAGCATTG CAAAGTGGCG GCCGAACCTT TCCTATTGCG ATAAAGAGCG ACACTATTCG TGGATGCGAC GAGATTACCC CCTTTTGGGT TGACAATTGG TCTGCTATAC CTTTTGATAA CATGTTTGCC GACGATTCGT TGTGGCTGCC TGCTTTGTTG TCTGGTTCAG ACTTCATCCG TTTGGACGGC TGGTTTCATT TTCAAGCCGG TGGTCAAAAC ATTAATTCTA TATCGCACTG GTACATGGAC ATCAATGACA ATCCTGCTTA AAACCATCCA GGCAATAGCC AGCTGCAAGG GGTGTGTGGA CAGTTGTTCT CCGAGGTTTA CTTTAGAACA GAGACTGTTG CATGCCTTGC ATG
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Protein sequence | MASSPAPQNT FRHVLPPDHL GTRHISHQAF CLAVNYTSSR EKEYSLVVVT DSEKQRILLG EKHRGFGTGM YNSFGGKLER EESATASACR ELEEETGIVS PLSIMEESHV GTLRFTFEDS ETEMVVHLFR VNVTISASGN DKSGGPALQS GGRTFPIAIK SDTIRGCDEI TPFWVDNWSA IPFDNMFADD SLWLPALLSG SDFIRLDGWF HFQAGGQNIN SISHWYMDIN DNPA
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