Gene PHATRDRAFT_47078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_47078 
Symbol 
ID7202161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011680 
Strand
Start bp346190 
End bp347102 
Gene Length913 bp 
Protein Length234 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002181189 
Protein GI219121679 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.410714 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TGCTTTGACT GTGAGTCCAC CGGATACAGT CTCGAGTTTT TAAAAAGGCT TTACGGTTAC 
ATTATTTTTT ATTCACCCCA GATAATTATT CATTTGCTCT CAGGGTTTTC GTGGCCATGG
CGTCGTCACC GGCTCCGCAA AACACTTTCC GACATGTTTT GCCGCCGGAC CATCTTGGAA
CAAGACACAT TTCCCATCAA GCCTTTTGTT TGGCAGTAAA CTACACATCC TCCCGAGAGA
AAGAGTACTC TCTAGTGGTG GTCACCGACT CGGAGAAGCA ACGTATACTG TTAGGTGAAA
AGCATCGAGG GTTTGGTACT GGGATGTACA ACTCATTCGG GGGTAAACTT GAGCGAGAGG
AGTCTGCCAC GGCTTCCGCT TGTCGCGAAC TCGAAGAAGA AACGGGCATT GTGTCGCCGC
TATCGATTAT GGAGGAATCA CATGTTGGAA CGCTGCGGTT TACTTTTGAA GATTCTGAGA
CCGAAATGGT AGTGCATTTG TTTCGAGTGA ATGTTACAAT ATCTGCTTCG GGCAACGATA
AAAGTGGTGG GCCAGCATTG CAAAGTGGCG GCCGAACCTT TCCTATTGCG ATAAAGAGCG
ACACTATTCG TGGATGCGAC GAGATTACCC CCTTTTGGGT TGACAATTGG TCTGCTATAC
CTTTTGATAA CATGTTTGCC GACGATTCGT TGTGGCTGCC TGCTTTGTTG TCTGGTTCAG
ACTTCATCCG TTTGGACGGC TGGTTTCATT TTCAAGCCGG TGGTCAAAAC ATTAATTCTA
TATCGCACTG GTACATGGAC ATCAATGACA ATCCTGCTTA AAACCATCCA GGCAATAGCC
AGCTGCAAGG GGTGTGTGGA CAGTTGTTCT CCGAGGTTTA CTTTAGAACA GAGACTGTTG
CATGCCTTGC ATG
 
Protein sequence
MASSPAPQNT FRHVLPPDHL GTRHISHQAF CLAVNYTSSR EKEYSLVVVT DSEKQRILLG 
EKHRGFGTGM YNSFGGKLER EESATASACR ELEEETGIVS PLSIMEESHV GTLRFTFEDS
ETEMVVHLFR VNVTISASGN DKSGGPALQS GGRTFPIAIK SDTIRGCDEI TPFWVDNWSA
IPFDNMFADD SLWLPALLSG SDFIRLDGWF HFQAGGQNIN SISHWYMDIN DNPA