Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_47026 |
Symbol | |
ID | 7202114 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011680 |
Strand | - |
Start bp | 222096 |
End bp | 222916 |
Gene Length | 821 bp |
Protein Length | 220 aa |
Translation table | |
GC content | 47% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002181329 |
Protein GI | 219121971 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.580546 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTGCATTGGA TTGCACCAAA AAGTCTAGAT CACCATGGTG TCTTGCTGGA GAACTCCTAC AACCAAAGAT GCATACCGGC TTTCATGGGT TAGTCTAGCT GTAACGCTGG TAGCCGCTGG AGCTGGGATT GGAATGTACG TGGTAAGTGC TTGTAAATAG TCTACGACGA TATTTGTCAC GGAAGCCTTT GTGCTCACGA TTGTGTCTTC CGTTGATTCG TTCCAATCAC AAACTAGGCT ACGGGATCAT CGCTGTGTTT GGTGTTTGGT CTCGAAAATT GCGTCGACTT TTTTAGTAGT GCAGTAGTTC TGTGGCGCTT TTTCGCTCCT ACGAAAGTCA ACCAGGAACT GGAAGAAAAG TTGCACCGTC GGGAAAAGCG AGCTTCCGTC GCGATTTCTT TCATTTTAGT ACTGCTCGGA ATGAGTATAC TTTCCACCGC TATTTCCGAT TTCGCGCGTG GAGAAGAAGA TCCGGATGGT CTTAGACTGG TAGTCGCAAT ATCTTTCTTT TCGTTCATTG TGTTTGGTAT TTTGGCCACT TTAAAGTTTC GCTACGCCAA GGCACTGCAG TCGGCCTCTC TAAATAAGGA CGGTATCTGT TCGTTGATTG GTACGGTATT GGCGGGCGCA CTTTTTGTGA ATACTTTGAT TATTGAACAA AAAGGAAGTT GGTGGTGGCT GGATCCGACG GTCGCGCTTC TGTGTGGTTT TGGTGCCATT GCGATTGGTA TCCACGCGGT CCACATGGCA CGATATAGCG ACGATCTGCC TGTTTTCACC ATGACTTGGT GGTTCTTGAG CCAAGGAGAT GGAACGGATG A
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Protein sequence | MVSCWRTPTT KDAYRLSWVS LAVTLVAAGA GIGMYVATGS SLCLVFGLEN CVDFFSSAVV LWRFFAPTKV NQELEEKLHR REKRASVAIS FILVLLGMSI LSTAISDFAR GEEDPDGLRL VVAISFFSFI VFGILATLKF RYAKALQSAS LNKDGICSLI GTVLAGALFV NTLIIEQKGS WWWLDPTVAL LCGFGAIAIG IHAVHMARYS DDLPPRRWNG
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