Gene PHATRDRAFT_47026 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_47026 
Symbol 
ID7202114 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011680 
Strand
Start bp222096 
End bp222916 
Gene Length821 bp 
Protein Length220 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002181329 
Protein GI219121971 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.580546 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTGCATTGGA TTGCACCAAA AAGTCTAGAT CACCATGGTG TCTTGCTGGA GAACTCCTAC 
AACCAAAGAT GCATACCGGC TTTCATGGGT TAGTCTAGCT GTAACGCTGG TAGCCGCTGG
AGCTGGGATT GGAATGTACG TGGTAAGTGC TTGTAAATAG TCTACGACGA TATTTGTCAC
GGAAGCCTTT GTGCTCACGA TTGTGTCTTC CGTTGATTCG TTCCAATCAC AAACTAGGCT
ACGGGATCAT CGCTGTGTTT GGTGTTTGGT CTCGAAAATT GCGTCGACTT TTTTAGTAGT
GCAGTAGTTC TGTGGCGCTT TTTCGCTCCT ACGAAAGTCA ACCAGGAACT GGAAGAAAAG
TTGCACCGTC GGGAAAAGCG AGCTTCCGTC GCGATTTCTT TCATTTTAGT ACTGCTCGGA
ATGAGTATAC TTTCCACCGC TATTTCCGAT TTCGCGCGTG GAGAAGAAGA TCCGGATGGT
CTTAGACTGG TAGTCGCAAT ATCTTTCTTT TCGTTCATTG TGTTTGGTAT TTTGGCCACT
TTAAAGTTTC GCTACGCCAA GGCACTGCAG TCGGCCTCTC TAAATAAGGA CGGTATCTGT
TCGTTGATTG GTACGGTATT GGCGGGCGCA CTTTTTGTGA ATACTTTGAT TATTGAACAA
AAAGGAAGTT GGTGGTGGCT GGATCCGACG GTCGCGCTTC TGTGTGGTTT TGGTGCCATT
GCGATTGGTA TCCACGCGGT CCACATGGCA CGATATAGCG ACGATCTGCC TGTTTTCACC
ATGACTTGGT GGTTCTTGAG CCAAGGAGAT GGAACGGATG A
 
Protein sequence
MVSCWRTPTT KDAYRLSWVS LAVTLVAAGA GIGMYVATGS SLCLVFGLEN CVDFFSSAVV 
LWRFFAPTKV NQELEEKLHR REKRASVAIS FILVLLGMSI LSTAISDFAR GEEDPDGLRL
VVAISFFSFI VFGILATLKF RYAKALQSAS LNKDGICSLI GTVLAGALFV NTLIIEQKGS
WWWLDPTVAL LCGFGAIAIG IHAVHMARYS DDLPPRRWNG