Gene PHATRDRAFT_47010 details

Gene Information

• Locus tag: PHATRDRAFT_47010
• ID: 7202244
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011680
• Strand: +
• Start bp: 169475
• End bp: 172978
• Gene Length: 3504 bp
• Protein Length: 1133 aa
• GC content: 54%
• Product: predicted protein
• Protein accession: XP_002181151
• Protein GI: 219121600

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.671968
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGAAGA TTGCGGAAAT TTCCGATCGC GCGGCCTGTG CAGCGTGGTG CCCACTCCAA 
GCACATCCCA ACGTTGTAGC TCTCGGAACC AAGGTACGTA CAAAGTACTG TTCTATTGAG 
ATTCACGGTA AAGAGTAGAT GGCTTCTTGA TCGCATGCTT ACGTAACTTG CTCTGGTTCC 
TCTGTTCTCG CTCAGGACTC TGGTGGAGGT GGTTTTGACG ACACCGGCGG AGAATTGGAA 
GTTTACGACT TGTGGAGTAG CAACATCACT TCTGGTGCTG ACGACAACGA CAAGGTTGGC 
TCTACGCAAC CCAAACTACT GGGATCCATC AAGACCGGAG CCCGATTTGC TAGCGTCGCA 
TGGACACCGT ACACACGCAA TGGAAAGTAC CCCATGGGAT TGCTCGCGGG CGGGATGGTA 
GATGGAACGA TTTACAATTG GGATCCTAGT CTAGTGATTG CCGCGTTTTC GCAAAACCAA 
ACAGCGCAAG CTGAGTTAGC GGCGTGTTTG GTGCACACCG TCCAGGCTCC GCCGGCATCG 
TCCAACAGCT CGTTCGGAGC CATGCAATTC AATCCACTCG AGCCGCATCA GCTCGCAGCG 
GGAGCCGCTA ATGGACACGT TTCCATTATC GATATTTCCG CCGATAAAGC GTCGGTGCAG 
GAACCCACCA CCGTAGCCTC ACAATTTCAA ACCTCCGAGA TTAAGGCCGT CGCCTGGAAT 
CCTCAAGTAT CCCATATTGT TGCGTCTGCC GCGGCCGATG GTTCCGTTGT CGTTTGGGAC 
TATAAATCCC GCAAAGCTTG GTGCGAGTTA CGGGCGGCAC ACGCTGCCGC GGCAGTCAAT 
GACGTGTGCT GGAATCCGTC ACAGGGACTG CATTTGCTCA CCTGCAGCGG AGATGACCGG 
GATGCCGTGC TCAAAGTATG GGATTTAGGA GCCAGTACGT CCATGCCACT CACGACTTTG 
ACGGGACACG CCGCTGGAAT TTTGAGCGCG GGCTGGTGTC CTCACGACGA AACATTGTTG 
CTCACGACGG CCAAGGATAA TCGTACGTTG TTGTGGGATT TGCAAACACT CCGACCCGTA 
GCGGAACTCC CGAATGCAGC GGCGGAAGCA GAATTGCAAC AGAAGCAGCA ACAACAAACA 
CAGCAAGCTC ATCCCACAAA CGTCTTTGCA GCCGCTGGTG CTGGTTCAGC CGGGGGTATG 
TCCGATCAAC GACACATGCG TTACGCCGTC GCTTGGTCTC CGTGGAAACG TGGTGTTGTC 
CTGACGTGTA GCTTGGATCG TAAAGTCGAG GCGCATTCCG TTTTGACCCT GGCCACCAAG 
TCGGGACGAC CGCCGGCCTG GATGCGACCA GCCTCGAGTG TATCATGCTC CTTTGGAGGT 
CTCGTCGTGT CCTGCGGAAG TCAGGATAAG GTTGTTTCGT TGCGAACCGT GTGTGAGCAA 
CCCGAATTCG CGGAAACGTC ACAACGACTA GAAACGGAAC TCAAGTCCCA AACCATTGTG 
GACTTTTGTC GATTCCGTCA TGTGACGGCA GCGAGAAACA AGACGGAAGC CGATATGTGG 
GGATTTATGC AAGTCCTCTT TGACGCCAAC GCGCGTCAAG CTCTTTTGCA GCATTTAGGA 
TACGATGCGG ATAGTATTGC GTCCACGGTG GCGGCCCGGT ACCCCCATGT AGCAACTACC 
ACCGAGCACG GAGAGTCATC CGTTAATGGT AGTAGCAACA AGAGCACCAC TGGGCTCCCC 
AAGCCGCCTT CCATGAAAAC CGCGTCAAGC ATGCTAGCAA AGTCTACCTT TGACCAGGCC 
GCCGAAGATT CCGTGAAGCA AGCCTTGCTT GTGGGGAACT TTGAGGCTGC CGTAGACGTT 
TGCTTGGCCA CCGGAAATTG GGCTGACGCA CTGGTCTTGG CCAGCTGCGG GGGTCCCGAT 
CTCTGGCAGG TTGTACAAAC GCGCTTCTTT GCTTCGGAAA CTGCACAGCG TCCATATTTG 
AACATTGTCA GCGCCGTAAT TCGTTCTCAA CTCTCCGATC TCGCCACTAG TCCGGACATA 
GCCACAAAGT GGTCGGAAAC GCTGGCCATT TTTTCGACCT ACGGTGCGTC GGAGGAATTC 
CCACAGCTCT GCGTGGCGCT TGGTGAATCT TTGGAAGAAG CGGGCGACCC GGCCAGTGCT 
ACACTCTGCT ACATGTGTGC TCTGAATTTG GATCACACAG TGAGGTTCTG GAAGTCACAA 
TTGGCGGAAG CTAGTCGCCA GAAAGGTGAG GGAACGAGTG ATGTCTTGGC ACTGCACGAA 
TTTGTGACGA AAGTGTCCGT CTTTTTGGAA GCGGTAGGGC CGTCCGCGAT TCTGTCGGAG 
GATATTGCAA CTTTGTTTGC CGATTATGCC GAGGTGTTGG CACAACAAGG TCTTTTGGTT 
ACGGCGGCCA AATATGCCAG AAAGGGGACT TCGATCGAAA GCCAGAAGCT GCGCGATCGT 
CTCTACAGGA GCCGCGCAAG TGCTTCTTGT TACGCGTCCT TAGGTACTGC ACCAGAATTT 
CCCTACCGCA TGTCAGCTGT GGAACCCAGT CGAGGACCGA CGGTTGTCAA GAATGCGTCT 
TATGCGCAGC ACCAACCGGA TGCAATTCAT CTGAATAAGC CGCAACCGAA AACCACCTAC 
GAACAGCGTC AGCAGTCCTC GATATACGGA CGGCAACATG AACGACGACA GACGTCATCT 
GGAGCACCAG TCCCAGCTGC AGTCATCGAG CTTCCTAGTG GATGGATGGA GCTTCATGAC 
CCTAACAGTA GACTCCCATA CTACGCAAAC CAGGCCACAG GGGAAACTAC GTGGGATCGT 
CCACAAGCAA TCCCGTCAAC AAATTCTCAG ACAGTGCCGC AGCAGACGTA CGCTAGTGTA 
CCAGCTAGTC AAGAGCCGGT GATGGATTCG TCTCGACACT CAACGCGTTC TCAGACCTCG 
GTCACTTCTG GCGTTTCAAC GCTGAGACCC AAGCCTAGTG TTGTCTCCAA ATACGGCGAC 
GGTTTTGTGA CGTCCGCGTC GCATCCAGAA CTTGCCGATC AATACGGCAA CATTGGCACC 
AGCAATCCCT ATAGCGGTGT AAATCGACCC GGTACAGCCG CAGCTGTGGC CGCGACAGCC 
CAGTCCGCTG TAGCTCCAAT ATCAGACACC CTCAACATTG AAACCCTGGA GGTCTCACCC 
GAGTTTGCTC ACATCAAGGA CACGCTGCTG GCGTGTGTCA ATGCCTTGAA AGACTATCCG 
TTATCTCCCG CTGACAAGCG ACAGTTGGCG GAAGCCGAAA AGGGAGTTGC TATCCTCGTC 
AAAAAAATTG TCCGCTATGA TATCGACGAA GAGACAGTCT CAAAGGTCTC ATTTATGATC 
GGCGCTCTGG CCAACGGTGA CTACCCCGCA GCGACGGCGA CCAATACCGC ACTAGTTAAT 
AGCGATTGGC GCGACCACAA GGACTGGCTT AAAGGGATGA AATCGTTGCT AGCGTTAGCG 
TCGAAGAAGT TTGCTCGTCA GTAG 

 

Protein sequence

MTKIAEISDR AACAAWCPLQ AHPNVVALGT KDSGGGGFDD TGGELEVYDL WSSNITSGAD 
DNDKVGSTQP KLLGSIKTGA RFASVAWTPY TRNGKYPMGL LAGGMVDGTI YNWDPSLVIA 
AFSQNQTAQA ELAACLVHTV QAPPASSNSS FGAMQFNPLE PHQLAAGAAN GHVSIIDISA 
DKASVQEPTT VASQFQTSEI KAVAWNPQVS HIVASAAADG SVVVWDYKSR KAWCELRAAH 
AAAAVNDVCW NPSQGLHLLT CSGDDRDAVL KVWDLGASTS MPLTTLTGHA AGILSAGWCP 
HDETLLLTTA KDNRTLLWDL QTLRPVAELP NAAAEAELQQ KQQQQTQQAH PTNVFAAAGA 
GSAGGMSDQR HMRYAVAWSP WKRGVVLTCS LDRKVEAHSV LTLATKSGRP PAWMRPASSV 
SCSFGGLVVS CGSQDKVVSL RTVCEQPEFA ETSQRLETEL KSQTIVDFCR FRHVTAARNK 
TEADMWGFMQ VLFDANARQA LLQHLGYDAD SIASTVAARY PHVATTTEHG ESSVNGSSNK 
STTGLPKPPS MKTASSMLAK STFDQAAEDS VKQALLVGNF EAAVDVCLAT GNWADALVLA 
SCGGPDLWQV VQTRFFASET AQRPYLNIVS AVIRSQLSDL ATSPDIATKW SETLAIFSTY 
GASEEFPQLC VALGESLEEA GDPASATLCY MCALNLDHTV RFWKSQLAEA SRQKGEGTSD 
VLALHEFVTK VSVFLEAVGP SAILSEDIAT LFADYAEVLA QQGLLVTAAK YARKGTSIES 
QKLRDRLYRS RASASCYASL GTAPEFPYRM SAVEPSRGPT VVKNASYAQH QPDAIHLNKP 
QPKTTYEQRQ QSSIYGRQHE RRQTSSGAPV PAAVIELPSG WMELHDPNSR LPYYANQATG 
ETTWDRPQAI PSTNSQTVPQ QTYASVPASQ EPVMDSSRHS TRSQTSVTSG VSTLRPKPSV 
VSKYGDGFVT SASHPELADQ YGNIGTSNPY SGVNRPGTAA AVAATAQSAV APISDTLNIE 
TLEVSPEFAH IKDTLLACVN ALKDYPLSPA DKRQLAEAEK GVAILVKKIV RYDIDEETVS 
KVSFMIGALA NGDYPAATAT NTALVNSDWR DHKDWLKGMK SLLALASKKF ARQ