Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_46972 |
Symbol | |
ID | 7202219 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011680 |
Strand | + |
Start bp | 46748 |
End bp | 47977 |
Gene Length | 1230 bp |
Protein Length | 324 aa |
Translation table | |
GC content | 47% |
IMG OID | |
Product | flavodoxin |
Protein accession | XP_002181124 |
Protein GI | 219121544 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | CTGCAAATAC CAACTATTAT ACAAAGCGAC ACATGTATTT CAGCCATCTC CAGAAGGCCG GCTCCGGTGC TCCGACCAGC TGAAGTATGC AGGTCGTCGT TTGCCATCTC TTCCTTGGAA TCTGATCTCG ACGCGAACAA GTACGTGTGC TCTGCAACTC TGACAAACCT GTGGGAACTA CATATTCTGA AACGCGAACA AAGGTGATTT GATTTCTTGG GTGGGTGGAA ATAGCATCGC CATGAATAAG ATTTCCGCAT TGCTCGCCGC TTCGGCTTTG GGCACATCGG CATCGTTTGC ACCAATTACA TCATTTCGTA CTTCGGATCC TCGCTCTGTG TCACTAGATA TGGCCGCTGT CGGAATATTT TTCGGCACGT CCACCGGTAG CACCGAAGCA TGCGCGCGGC AGATATACAA AGCATTCGGC AGCGAGTTGG CCGCCGAACC GGTTGACGTC GAAAATGTAG ACAACCTTGT GAAAGCCTTT GGGTCTCATG ATTCATTGGT CGTCGGTACT CCTACCTGGA ATACAGGGGC CGATACAGAA CGTAGTGGAA CTGGCTGGGA CGTGCTCTAC TACAACCAAC TTGCATTCAT GAAAAGTACT CTAGAAGGAA AGAAAATAGC TGTATTTGGT TTAGGGGATC AGATTACATA TTCTGAAAAC TATGCTGATG CGACTGGTGA GCTCTTCGAT GTCTTCGATA GCCTCGGTTG CCAAATGCTG GGTTTATGGA GCCGAGAAGG CTACGCAATT AAAGCATCGA AGAGTATTAG GGACGGAAAA TTCTGCGGCT TGCTTCTGGA TGAAGTCAAT CAAGAGGAAC TTACGGCTGA GCGTATCGAG AGATGGGTGG CCCAGCTGAA AGACGAAGGT ATCTTAGGCA GCAAAAAAGC CTCATCTCTG CCTACTATCT CCCCCGAAAT TACGCCTCAT CCTCCTAGTA CGATGCCCCC GATTTTTAAC TACGATGCAG ATGCATTAAA AGGTTCTTCA ATGAATGAAG AGCAGACCGA AACTGAAAGG CTGATCGAAT ATCGCGAATT AGAAAGAAAT TCGTTTGAAG AAAAAGAAAG GGTTCGCTCG TCAGATGACT TTACACCTCA TTTTAATCCA TTTACGGGCA GGACCATGTG GACGAGCGCT GATGGACGTA CATCGTATGT CACCGTTAAG GATCCTACGT CTACCCAAAG CAAACTCTCG TCCTAAAAAA CCATACAGTT
|
Protein sequence | MNKISALLAA SALGTSASFA PITSFRTSDP RSVSLDMAAV GIFFGTSTGS TEACARQIYK AFGSELAAEP VDVENVDNLV KAFGSHDSLV VGTPTWNTGA DTERSGTGWD VLYYNQLAFM KSTLEGKKIA VFGLGDQITY SENYADATGE LFDVFDSLGC QMLGLWSREG YAIKASKSIR DGKFCGLLLD EVNQEELTAE RIERWVAQLK DEGILGSKKA SSLPTISPEI TPHPPSTMPP IFNYDADALK GSSMNEEQTE TERLIEYREL ERNSFEEKER VRSSDDFTPH FNPFTGRTMW TSADGRTSYV TVKDPTSTQS KLSS
|
| |