| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_42116 |
|---|
| Symbol | |
|---|
| ID | 7202200 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011680 |
|---|
| Strand | + |
|---|
| Start bp | 848733 |
|---|
| End bp | 850008 |
|---|
| Gene Length | 1276 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002181275 |
|---|
| Protein GI | 219121859 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTGGAA TCTTTGTACT CGGCTACATG GGCATTATTT TCGAAGAAGT CTTTGAATTT
AATAAAGCCG GCGTCGCGCT CTTGATGAGC ACCGGATTAT GGGTGACCTA CGCGGACTTT
TACAACAGTG CCGGTACGGC GTCCACGGCT GTACTGGAGC AACTGGCGGA ACAACTCTCG
GAAGTATCCG ATATTTGCTT TTTCCTCCTG GCCGCTTCGA CAATTGTGGA AGTGGTGGAC
GCCCATCAAG GGTTCAAAGT TGTCACCAAC CAAATAAAGA CCACTTCCAA AAAGTCTCTG
TTTTGGACCA TTGGATTCCT GACCTTCTTT TTGTCGGCCA TTCTTAATAA CTTGACCATC
ACAATTGTCA TGGTCAGTCT ACTGCGCAAG CTCGTGCCCA ACGTAGATGA TCGTCGTTTA
TTCGGAGCCA TGGTTGTCGT GGCGGCCAAC GCTGGTGGTG TTTGGACGCC AATCGGGGAC
GTGACCACGA CCATGCTATG GATTAACAAT CAACTATCAA CGATTCCGAC CGTTCTCGAT
CTCTTTCTAC CGTCGCTAGC ATGCTTGGTA GCTTCCTTGG CCTTTTTGGT CAACAAGGTG
GAAGAAGACG ACTCTTTAAA GGCATCGACA CTACCGGAAC CGACCCCGTT GTCGCAACGT
GGGCAGTTGG TCTTCTACAG TGGAATTGCC GCTCTGTTAT CGGTGCCTGT CTTTAGCGAA
CTGACAGGAC TGCCACCGTA TCTGGCCATG TTAACGGGTC TTGGGGCCAT GTGGACCCTG
ACCGACATCA TTCACATGGG AGACAAAGAG GAAGGGCTCA AAGTGCCGGC GGCCTTGTCC
AAATTAGATA CATCCGGCAT TCTATTTTTC CTCGGAATTC TCATGAGTAT TGGCGCATTG
GACAAGAGCG GCTTGCTCAA AAGTCTAGCC GTCTTTCTGT CGGACAACTT GCCCAGTCTC
GATATTATTG CTACCGTTAT TGGTATCGCA TCGGCCTTGA TCGATAACGT TCCGTTGGTC
GCGGCAACCA TGGGTATGTA TGATCTATCC GAATATGGTA CGGACGATAA ACTCTGGCAG
TTGATCGCGT TGTGTGCTGG TACAGGGGGT TCCATTCTAG TAATTGGCTC CGCCAGTGGC
GTGGCCCTCA TGGGACTGGA GAAGGTGGAC TTTTTGTGGT ACGCCAAGAA TGTTTCGATC
GGAGCCGCGG TAGGGTACTT CGCCGGAATT GCAACATATT TGGCCCAGTA CGCAATCTTT
CACGGTGATC TGCTGA
|
|---|
| Protein sequence | MIGIFVLGYM GIIFEEVFEF NKAGVALLMS TGLWVTYADF YNSAGTASTA VLEQLAEQLS
EVSDICFFLL AASTIVEVVD AHQGFKVVTN QIKTTSKKSL FWTIGFLTFF LSAILNNLTI
TIVMVSLLRK LVPNVDDRRL FGAMVVVAAN AGGVWTPIGD VTTTMLWINN QLSTIPTVLD
LFLPSLACLV ASLAFLVNKV EEDDSLKAST LPEPTPLSQR GQLVFYSGIA ALLSVPVFSE
LTGLPPYLAM LTGLGAMWTL TDIIHMGDKE EGLKVPAALS KLDTSGILFF LGILMSIGAL
DKSGLLKSLA VFLSDNLPSL DIIATVIGIA SALIDNVPLV AATMGMYDLS EYGTDDKLWQ
LIALCAGTGG SILVIGSASG VALMGLEKVD FLWYAKNGTS PELQHIWPST QSFTVIC
|
|---|
| |